Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02265 ATGGCTAGATTCGGAATCACAACAGATAACTTCTCCTACATTTGCCGTGGAGATTTCAGTTTGACTTCCTTTTCCAGCCAAAGGTGCATGATAGACATTGTCAACATGTTTTTCCTGGGTGTCTTTTATGTCTCATTGCTCTCCAATTTGATCAAGAAAAGACCAGCAAATGCAAGTTGTAGCTGCAGAAAGGGATTGGTTCGTGTAGTTACTTCGATCTGTTGTACTCTTGTAACCATTGCATATTTTATTGATGGTTTGTGGAATTTCATTGCTAAAACCATAGGCTTCAATCAGCTGAACTTGTTGGTTTGCATTGTGAGAGGACTAGTTTGGATATCTTTAGCAGCTTCATTGTTTGTTCAAAGATTCCAATGGATAAAAAAGATATGCTCTATTTGGTGGGTGTTTTCATGTACATTGGTTTCATCACTCAATGTTGAAATTCTGCTTAAAGAGCATAGATTTCAATTTTTTGACATGGCCATATGGCCAGTGCACATCCTAACTGTTTTCTGTGCCTTCCAAAACCATGGCTACTTTGTCCCACAAGAAACCCCAGATGCCAGTTTATGTGAGCCTCTATTAGTTCATAAGGGAAAGGATAAAACAGGACTAGGCCATGCCTCCTTTCTCAGTAGATCCACTTTCTCTTGGATGAATGCTTTGCTCAGTTTGGGTTACTCAAAGCCACTAACACTTGAAGACATCCCTTATCTTTCTTCTGAAGATAAAGCTGATTTTGCATACCAAAAGTTTTCACATGCATGGGTTTCCCTTTTGAGGGAGAGGGGCAGGAACAATTCTACAAACTTGGTCCTATGGTCCATAGCCCGAGTTTACTTGAAAGAAAACATCTTCATAGCCATTTGCGCATTTCTAAGGACAATTTGTGCTGTTTTTTCTCCTTTACTTGTTTATGCTTTTGTAAACTATTACAGTTTCACTGACAAAGAGTTAAAACAAGGGATGGCCATAGTGGGGTGTCTTATATTTGCGAAGGTGGTTGAGTCTGTGTCTCAAAGGCATTGGTCTTTTAACTCAAGGAGGTTAGGAATGAAAATGAGATCTGCTTTAATGGCTGCAGTGTATCAAAAGAAATTAAAACTTTCAGCTTTGGGTAGGAAAAGACATTCAACTGGTGAGATTGTGAATTACATTGCAGTTGACGCATATCGAATGGGGGATTTTCCATGGTGGTTTCATACGTTGTTGTTTTCTGCATTGCAAGTTTTTCTGGCTCTTGGTGTCCTTTTTGGTGTTGTGGGTTTAGGTGCACTTCCTGGTTTAGTGACACTTCTCATATGTGGATTTCTCAATGTACCATTTGCAAAGATCCTTCAAAAGTATAGGTCAGACTGTATGATTGCGCAAGATGAGCGTCTGAGGTCAACTTCTGAGATTCTTAATAGTATGAAAATCATAAAGCTACAGTCCTGGGAGGATAACTTCAAGAAGTTAGTTGAATCCCTTCGCGCTAAAGAGTTTAAATGTTTGGCTGAAGTACAGTTCATGAGAGCTTGTGGAACATTTATATATTGGATGTCCCCTACCATCATTTCTTCAGTTATTTTAATGGGATGTGCGCTTTTCCAGAGTGCCCCTTTGAATGCTGGAACTATCTTCACAGTTCTTGCAGCAATGCGAAGCATGGGAGAACCTGTCATATTTATTCCAGAAGCACTTTCTATTCTGATCCAAGCTAAGGTCTCCTTTGATCGTCTCAACACTTTTTTGCTTGATGATGAGATAAAAGGCGATGATGTTGGAAGAACTTCAAAAGATTCTTGCAGCAAGGGTGTTGAAATTGTAGCAGGCAACTTCAATTGGGATCAGCGATCAGTGCCTCCAACTTTGAGAGAAGTGAATTTTGAGATCAAGTGGGGCCAGACAGTAGCAGTTTGTGGCCCAGTTGGAGCTGGAAAAACATCTCTTCTGTATGCAATACTCGGAGAGATACCTAAAATTTCAGGAACTATTGGTGTAGGTGGGACACTAGCCTACGTTTCCCAAATTCCTTGGATCCAAAGTGGTACAATTCGTGACAATATTCTATATGGAAAACCAATGGATGAAACCAGGTATGAATATACCATTAAGGTATGTGCCTTGGATAAGGATATCGTTGGCTTTAGCCACGGTGATCTTACAGAAATAGGTCAGAGAGGGATAAACATGAGTGGTGGACAAAAGCAAAGGATTCAACTAGCTCGTGCAGTCTATAATGATGCAGATATATATCTCCTAGATGACCCTTTTAGTGCAGTAGATGCTCATACTGCATCTGTTCTGTTTAATGATTGTGTCAGGACTGCTTTAAGAAGGAAAACAGTTATTCTTGTGACTCATCAAGTTGAATTTCTCGCAGAAGTTGATAAAATCCTGGTAATGGAAAGAGGAAAAATTAGTCAATCGGGTAGCTATGAAGATCTGTTGACTGCTGGAACAGCCTTTGAACAGCTTTTGAGTGCTCATAGAGAGGCAATTACAGGGATAGAAAAAATTAGTGCGAACAGAAAAGAAGATGAGAATGTGATTACAGTTCAGCCTGAAGATTCTCATGTTTCTAATCTCACTAAATGTGGAAGTGATGGGGACATTTTTAACAAGATTCAACTTACACAAGATGAAGAAAAGGAGAGTGGTGATGTTGGGTGGAAGCCATTCTGTGACTATATTTTATTCCCTAAGGGGTCTTTGCTTCTATGTTTGAGCATATTAGCACAGTTGGTTTTTGTAGGTTTGCAGGCTGCATCAACTTATTGGCTTGCTATAGCCAATGAGATGTCAAGAGTAACTAGCAGCATCTTGATTGGAGTCTATAGTGTGACTTCTTTTTTAAGCATTTTTTTTGTGTATCTGAGATCTTACTTTGCTGCACATCTTGGTTTAAAAGCTTCTAAAGCTTTTTTCTCTGCCTTCACTGATTCTATCTTTAATGCTCCTATGTTGTTCTTTGATTCAACCCCAGTAGGGAGGATTTTGACCAGAGCTTCATCAGATTTAAGTATTTTAGATTTTGATACCCCATTTACCACCATCTTTGTGATAGCTGAAGTAACTGAACTTCTGACAATGATTGTGATAATGGTTTCGGTCACATGGCAAGTGTTCATTGTTGCAGTTCCTGCCATGGTGGCTTCAAAATATATTCAGGGCTATTATCAAGCTTCTGCAAGAGAAATTATGCGAATCAATGGAACTACAAAAGCTCCACTTATGAATTTTACGGCTGAGACATCTCTTGGTGTGGTCACTATAAGAGCTTTCAACATGGCTGACAGATTTTTCAAAAACTACCTTAATCTTGTTGATACTGATGCCACAATGTTCTTTCATTCCAATGCTGCCATCGAATGGCTAATTATAAGGATTGAGGTACTTCAGAATTTGACACTCTTCACTGCAGCTTTGTTGCTTGTGCTTCTTCCAAAGGGATATGTGGACCCTGGCCTTGTGGGACTTTCTCTATCTTATGCTTTTTCAATGACAGCAACCGTAGTTTATCTGACTCGAATGTTTTGCAACTTAGCAAACTATGTAATCTCTGTTGAAAGAATCAAGCAATTCATTCACATACCAGCAGAGCCTAGTGCTATTGTAGAGGACAATAGACCACCACCTTCTTGGCCTTCTAAAGGTCGAATAGATCTCCAATCTCTAGAGATCAGATATCGTCCAAATTCTCCATTAGTCCTGAAGGGCATCTCTTGTACGTTTAAAGAAGGGAGTAAAGTTGGAGTTGTAGGAAGAACAGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTACTAGAGGTGACATTCTTATAGATGGAATTAATATATGCTCAATTGGGCTTAAAGATTTAAGAATAAAGCTAAGCATCATTCCTCAAGAACCAACCCTTTTCAAGGGTAGCATTAGAAATAACTTGGACCCTCTAGGCCTGTACTCTGATGATAAAATATGGAAGGCTTTAGAGAAATGTCAGCTCAAGGCAACAATTAGTAGTCTACCAAATCTCTTGGACACTTCAGTGAGTGATGAAGGAGAAAACTGGAGTGTGGGGCAGCGCCAACTCATATGTCTAGGAAGAGTGCTGCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCTTCCATTGATTCTGCCACAGATGTTATTCTACAACGAACCATCAGACAAGAATTTTCAGAGTGCACAGTCATAACTGTGGCTCACAGAGTTCCAACTGTAATGGACAGTGACATGGTCATGGTTCTATCTTATGGGAAACTGGTGGAGTATGACAAGCCTTCAAAGCTTATGGATACTAGCTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCCAACTGCAACAGGAATTTGTCCCCAAAAGATTAG 4392 0.3969 MARFGITTDNFSYICRGDFSLTSFSSQRCMIDIVNMFFLGVFYVSLLSNLIKKRPANASCSCRKGLVRVVTSICCTLVTIAYFIDGLWNFIAKTIGFNQLNLLVCIVRGLVWISLAASLFVQRFQWIKKICSIWWVFSCTLVSSLNVEILLKEHRFQFFDMAIWPVHILTVFCAFQNHGYFVPQETPDASLCEPLLVHKGKDKTGLGHASFLSRSTFSWMNALLSLGYSKPLTLEDIPYLSSEDKADFAYQKFSHAWVSLLRERGRNNSTNLVLWSIARVYLKENIFIAICAFLRTICAVFSPLLVYAFVNYYSFTDKELKQGMAIVGCLIFAKVVESVSQRHWSFNSRRLGMKMRSALMAAVYQKKLKLSALGRKRHSTGEIVNYIAVDAYRMGDFPWWFHTLLFSALQVFLALGVLFGVVGLGALPGLVTLLICGFLNVPFAKILQKYRSDCMIAQDERLRSTSEILNSMKIIKLQSWEDNFKKLVESLRAKEFKCLAEVQFMRACGTFIYWMSPTIISSVILMGCALFQSAPLNAGTIFTVLAAMRSMGEPVIFIPEALSILIQAKVSFDRLNTFLLDDEIKGDDVGRTSKDSCSKGVEIVAGNFNWDQRSVPPTLREVNFEIKWGQTVAVCGPVGAGKTSLLYAILGEIPKISGTIGVGGTLAYVSQIPWIQSGTIRDNILYGKPMDETRYEYTIKVCALDKDIVGFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTASVLFNDCVRTALRRKTVILVTHQVEFLAEVDKILVMERGKISQSGSYEDLLTAGTAFEQLLSAHREAITGIEKISANRKEDENVITVQPEDSHVSNLTKCGSDGDIFNKIQLTQDEEKESGDVGWKPFCDYILFPKGSLLLCLSILAQLVFVGLQAASTYWLAIANEMSRVTSSILIGVYSVTSFLSIFFVYLRSYFAAHLGLKASKAFFSAFTDSIFNAPMLFFDSTPVGRILTRASSDLSILDFDTPFTTIFVIAEVTELLTMIVIMVSVTWQVFIVAVPAMVASKYIQGYYQASAREIMRINGTTKAPLMNFTAETSLGVVTIRAFNMADRFFKNYLNLVDTDATMFFHSNAAIEWLIIRIEVLQNLTLFTAALLLVLLPKGYVDPGLVGLSLSYAFSMTATVVYLTRMFCNLANYVISVERIKQFIHIPAEPSAIVEDNRPPPSWPSKGRIDLQSLEIRYRPNSPLVLKGISCTFKEGSKVGVVGRTGSGKTTLISALFRLVEPTRGDILIDGINICSIGLKDLRIKLSIIPQEPTLFKGSIRNNLDPLGLYSDDKIWKALEKCQLKATISSLPNLLDTSVSDEGENWSVGQRQLICLGRVLLKRNRILVLDEATASIDSATDVILQRTIRQEFSECTVITVAHRVPTVMDSDMVMVLSYGKLVEYDKPSKLMDTSSSFSKLVAEYWSNCNRNLSPKD 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02265 1463 Gene3D ABC transporter type 1, transmembrane domain 868 1197 IPR036640 GO:0005524|GO:0016020
Spst4g02265 1463 FunFam ABC transporter C family member 3 1199 1450 - -
Spst4g02265 1463 CDD ABCC_MRP_domain2 1214 1434 - -
Spst4g02265 1463 SMART AAA_5 628 801 IPR003593 GO:0016887
Spst4g02265 1463 SMART AAA_5 1242 1435 IPR003593 GO:0016887
Spst4g02265 1463 FunFam ABC transporter C family member 10 269 583 - -
Spst4g02265 1463 Pfam ABC transporter transmembrane region 903 1161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst4g02265 1463 Pfam ABC transporter transmembrane region 286 548 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst4g02265 1463 Gene3D - 1199 1450 IPR027417 -
Spst4g02265 1463 SUPERFAMILY ABC transporter transmembrane region 274 581 IPR036640 GO:0005524|GO:0016020
Spst4g02265 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 286 567 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst4g02265 1463 CDD ABC_6TM_ABCC_D1 287 575 IPR044746 GO:0140359
Spst4g02265 1463 Gene3D ABC transporter type 1, transmembrane domain 272 581 IPR036640 GO:0005524|GO:0016020
Spst4g02265 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 584 824 IPR003439 GO:0005524
Spst4g02265 1463 Pfam ABC transporter 1233 1381 IPR003439 GO:0005524
Spst4g02265 1463 Pfam ABC transporter 619 753 IPR003439 GO:0005524
Spst4g02265 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 601 823 IPR027417 -
Spst4g02265 1463 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 208 1452 - -
Spst4g02265 1463 FunFam ABC transporter C family member 5 867 1197 - -
Spst4g02265 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1205 1449 IPR027417 -
Spst4g02265 1463 Gene3D - 582 848 IPR027417 -
Spst4g02265 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1218 1450 IPR003439 GO:0005524
Spst4g02265 1463 FunFam Multidrug resistance protein associated1 580 844 - -
Spst4g02265 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 904 1179 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst4g02265 1463 CDD ABCC_MRP_domain1 601 801 - -
Spst4g02265 1463 CDD ABC_6TM_ABCC_D2 898 1191 IPR044726 GO:0140359
Spst4g02265 1463 ProSitePatterns ABC transporters family signature. 726 740 IPR017871 GO:0005524|GO:0016887
Spst4g02265 1463 SUPERFAMILY ABC transporter transmembrane region 898 1196 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02265 Spst-Chr4 63440466 63446153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02265 595 847 Calmodulin-binding Proteins AT2G36910 27.437 1.93e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02265 - - gmx:100813711 2472.58