Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02264 ATGTGTGGAAGTCCAAGAAAAACCTGGACTTTCCTTGTTGTTTCTATCTGCTGTGCTATTATTAGCATTGCATTGTACGTTATTGGCTTGTGGAATCTCATAGACAAAACTGGTAACTCCTGGGTACCTTCCATTGTCAGAGGATTTGTTTGGACTTCTTTCACAGTTTCTCTGCTTGTTCAGACACACAAATGGATCAAAATTCTGAACTCTCTCTGGTGGGCATGTTCCTGTGTACTGGTTTCAGCTCTCAACATTGAAATTTTGTATAGAAAGCATGCAATAGAAATTTTTGATGTTCTACAATGGCTCTTACACTTGCTTCTTCTCTTCTGTGCTTTCCAAAACCTTGGTTACTTTGTCACTCAACGCGTGCCAAAATGTTTGTCTGAGCCACTGTTAGCCCAGGATGTTGACACACAACGAACAGGACTTGGCCGTGCTTCTATTCTCAGCAAGTTGACTTTCTCTTGGGTTAATCCCTTACTCAAACTGGGTTACTCAAAGCCACTAGCTCTTGAAGACATCCCTTCCCTTCTATCTGAAGATGAAGCAGACTCGGCCTACCAAAACTTTATACATGCATGGAATGAATACTTTGTGAGGGCAGGGAACAATAACAATAACAAAAACTTGGTTCTTTGGTCTGTTGTTAGAACTCACTTAAATGAGAACATATCAATAGCTTTATACGCATTAATCAGAACCATTGCCGTGAGTATATCTCCCTTAATACTCTTTGTTTTCGTCAACTACTCAAATAACAGGAATGCCACGGATACGGATCTCAAAGAGGGTCTTTTCATTGTGGGTGTTCTTGTCGTCTCTAATGTGGTTGCTTTTGTGTCCCAGAGACATTTGTTTTTTTATTCCAGGAGGTCGGGATTGAAGATGAGATCAGCTCTGATGGTGGCAGTGTATAAAAAACAGCTAAAGCTTTCAAACTCAGCAAGGACAAGACACTCAACAGGTGAAATAGTGAATTACATTGCGGTTGATGCATATCGCATGGGAGAATTTCCATGGTGGTTTCATACGACATGGTCATCTACATTGCAACTTGTTCTGTCTATTGGGATTCTTTTCGAAGTTGTGGGAGTTGGTGCTCTTCCTGGTTTAGTCCCTCTTTTTATATGTGGACTTATCAATGTACCATTTGCCAAGATCCTACAGAAGTGCATGGCACAGTTCATGATTTCACAGGATGAACGTCTTAGAACAACTTCAGAAATTCTAAATAGCATTAAAATCATTAAGTTACAGTCCTGGGATGACAAATTCAAGAGTTTGGTCGAGAACCTACGTGCTAAAGAGTTCATTTGGTTATCTAAGGCACAAATCATGAAAGCTTATGGGACATTTCTATATTGGATATCTCCTACCATCGTTTCTGCTGTTGTTTTCCTCGGTTGTGCTGTTTTCAATAGTGCTCCATTGAATGCTGGGACCATTTTTACAGTTCTTGCAACGTTGAAGAACTTGTCAGAACCTGTTCGAATGATTCCAGAGGCTCTATCTATTATGATCCAAGTTAAGGTATCCTTTGATCGTCTCAATACCATTTTACTTGATGAAGAACTAGAGAGTAGTGATGGCAACAAAAGATATATAAACCGAAGTTCAATTAGTGCGGTAGAAATCCAAGCTGGCAACTTCATTTGGGATCATGAAGCAGTGTCCCCAACTTTAAAAGATGTCAATCTAGCAATCAAACGGGGACAGAAGGTTGCGATCTGTGGGCCAGTTGGAGCTGGGAAATCATCACTTCTGTATGCGGTACTAGGAGAGATTCCGAAGATTTCAGGATCTGTTAATGTGTGTGGCACCATAGCATATGTTTCTCAAACTTCTTGGATACAAAGCGGAACAGTTCGAGAGAATATACTCTTCGGCAAGCCAATGAAGAAAACTAGATATGAGAGTGCCATCAAAGTTTGTGCTTTAGATAAGGATATCAACGATTTTAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGTGCAGTCTACAATGATGCTGACATTTATCTCCTCGACGACCCTTTCAGTGCAGTTGATGCTCATACGGCCGCAATTCTGTTCAATGATTGTATAATGACTGCTCTAAGAGAGAAAACAGTCATCCTAGTGACCCATCAAGTGGAGTTTCTATCAGAAGTTGATACAATCCTGGTGATGGAAGGTGGAAAAGTTACTCAATCAGGTAATTATGAGAATCTCTTAACTGCTGGGACAGCCTTTGAGCAACTTGTGAACGCTCATAAGGAAGCAATTACTGAATGGGATCAAAATAATGAAAACAAAACTCGTAGAGAAGAGTCTCAAGGTTTTTATCTTACTAAAAATCAAAGCGAGGGGGAGATTTCTACTGAGGATCAACATGGTATACAACTTACACAAGAAGAAGAAAAAGAGATTGGTGATGTTGGGTGGAAGACATTCTGGGATTATATTTCATTTTCCGGGTGTTCGTTGATGCTGTGTTGGATGATATTGGTACAACTTGTTTTTGTTGTTTTGCAGACTGCATCAACGTTTTGGCTTGCTCTAGCCATTGAACTTCCAAATTTAACTAGTGCCACGCTAATTGGGGTTTACTCATTAATTTCATTTTTGGGAACTGCATTTGCATTTCTAAGGACTCTGGTTGGTGCACAGCTCGGATTAAAAGGTTCTACAGCATTCTTCTCAAGTTTCACTACTTCTATTTTCAATGCTCCTATGTTGTTCTTTGATTCGACCCCAGTTGGAAGGATTTTAACCCGAGCTTCATCAGATTTAAGTATTTTGGACTTTGATATACCTTTCGCCATCACTTTTGTAGCATCTGTTCCTATTGAAATTTTGGTGATAATTTGTATAATGGTTTTCGTAACATGGCAAGTTCTCATTGTTGCTGTTCCAGCAATGGTTGCATCAAAATATGTTCAGGGGTATTATCAACCCTCCGCAAGGGAATTAATAAGGATCAATGGAACCACAAAAGCTCCTGTGATGAATTTTGCAGCTGAGACATCAGATGGTGTGGCTACTGTAAGAGCATTTAACATGGCAGACAAATTTTTAAAGAATTACGTAAAACTTGTAAACACCGACGCAACACTGTTCTTTCATTCTAATGTGGCCATGGAATGGTTGACTTTAAGGATCGAAATACTTCAAAGTTTGACAGTAATAACTTCAGCTTTGTTGCTTGTTCTAGCTCCTCAGGGATACGTATCCCCAGGCCTTGTGGGACTGTCTCTCTCTTATGCTCTCACCTTAGCAGGAACCCATATATTTTTTACTCGATGGTATTGCAACTTATTGAACTATATTATCTCTGTTGAAAGAATCAAGCAATTCATTCACCTACCATCAGAGCCTCCTGCCATTGTGAAGGACCACCGACCTCCATCGTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCCTTAGAGATTAGGTATCGTCCTAATGCTCCATTAGTGCTTGAGGGTATCACTTGTACGTTTAGAGAAGGGAGTAGAGTGGGAGTTGTAGGAAGAACCGGAAGTGGAAAAAGTACACTCATAAGTGCTTTGTTTCGCCTAGTTGAGCCAGCAAGAGGTGATATTCTTATAGATGGGATTAACATATGCTCAATGGGGTTGAAGGATTTGAGAATGAAGCTAAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACCAACTTGGACCCTTTAGGCCTGTACTCAGATGATGATATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGAAACTGTGAGCCATCTACCAAATCTCTTAGACTCTTTGGTGAGTGACGAAGGAGAAAACTGGAGTGTGGGGCAGCGCCAACTCATATGTCTAGGAAGAGTGCTGCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCAACTGCCTCCATTGACTCTGCCACAGATGCTATTCTACAGAGAATTATTAGAGAAGAATTTGCAGAATGCACAGTTATAACAGTGGCTCACAGGGTTCCAACTGTAATAGACAGTGACATGGTTATGGTCCTCTCCTTTGGGAAAGTGGTGGAATATGATAAGCCTTCAAGACTAATGGACACCAACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGGCAAGCTGCAGCAAGAATTCCTCCTGA 4203 0.4071 MCGSPRKTWTFLVVSICCAIISIALYVIGLWNLIDKTGNSWVPSIVRGFVWTSFTVSLLVQTHKWIKILNSLWWACSCVLVSALNIEILYRKHAIEIFDVLQWLLHLLLLFCAFQNLGYFVTQRVPKCLSEPLLAQDVDTQRTGLGRASILSKLTFSWVNPLLKLGYSKPLALEDIPSLLSEDEADSAYQNFIHAWNEYFVRAGNNNNNKNLVLWSVVRTHLNENISIALYALIRTIAVSISPLILFVFVNYSNNRNATDTDLKEGLFIVGVLVVSNVVAFVSQRHLFFYSRRSGLKMRSALMVAVYKKQLKLSNSARTRHSTGEIVNYIAVDAYRMGEFPWWFHTTWSSTLQLVLSIGILFEVVGVGALPGLVPLFICGLINVPFAKILQKCMAQFMISQDERLRTTSEILNSIKIIKLQSWDDKFKSLVENLRAKEFIWLSKAQIMKAYGTFLYWISPTIVSAVVFLGCAVFNSAPLNAGTIFTVLATLKNLSEPVRMIPEALSIMIQVKVSFDRLNTILLDEELESSDGNKRYINRSSISAVEIQAGNFIWDHEAVSPTLKDVNLAIKRGQKVAICGPVGAGKSSLLYAVLGEIPKISGSVNVCGTIAYVSQTSWIQSGTVRENILFGKPMKKTRYESAIKVCALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCIMTALREKTVILVTHQVEFLSEVDTILVMEGGKVTQSGNYENLLTAGTAFEQLVNAHKEAITEWDQNNENKTRREESQGFYLTKNQSEGEISTEDQHGIQLTQEEEKEIGDVGWKTFWDYISFSGCSLMLCWMILVQLVFVVLQTASTFWLALAIELPNLTSATLIGVYSLISFLGTAFAFLRTLVGAQLGLKGSTAFFSSFTTSIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPFAITFVASVPIEILVIICIMVFVTWQVLIVAVPAMVASKYVQGYYQPSARELIRINGTTKAPVMNFAAETSDGVATVRAFNMADKFLKNYVKLVNTDATLFFHSNVAMEWLTLRIEILQSLTVITSALLLVLAPQGYVSPGLVGLSLSYALTLAGTHIFFTRWYCNLLNYIISVERIKQFIHLPSEPPAIVKDHRPPSSWPSKGRIDLQALEIRYRPNAPLVLEGITCTFREGSRVGVVGRTGSGKSTLISALFRLVEPARGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDDIWKALEKCQLKETVSHLPNLLDSLVSDEGENWSVGQRQLICLGRVLLKRNRILVLDEATASIDSATDAILQRIIREEFAECTVITVAHRVPTVIDSDMVMVLSFGKVVEYDKPSRLMDTNSSFSKLVAEYWASCSKNSS 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02264 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 844 1105 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst4g02264 1400 Pfam ABC transporter 1173 1321 IPR003439 GO:0005524
Spst4g02264 1400 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 147 1392 - -
Spst4g02264 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1158 1390 IPR003439 GO:0005524
Spst4g02264 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 547 768 IPR003439 GO:0005524
Spst4g02264 1400 FunFam ABC transporter C family member 10 209 526 - -
Spst4g02264 1400 CDD ABC_6TM_ABCC_D1 228 518 IPR044746 GO:0140359
Spst4g02264 1400 FunFam ABC transporter C family member 3 1139 1390 - -
Spst4g02264 1400 Pfam ABC transporter 563 697 IPR003439 GO:0005524
Spst4g02264 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1146 1389 IPR027417 -
Spst4g02264 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 228 510 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst4g02264 1400 ProSitePatterns ABC transporters family signature. 670 684 IPR017871 GO:0005524|GO:0016887
Spst4g02264 1400 FunFam Multidrug resistance protein associated1 523 788 - -
Spst4g02264 1400 Gene3D ABC transporter type 1, transmembrane domain 805 1137 IPR036640 GO:0005524|GO:0016020
Spst4g02264 1400 CDD ABC_6TM_ABCC_D2 840 1131 IPR044726 GO:0140359
Spst4g02264 1400 Gene3D - 1139 1390 IPR027417 -
Spst4g02264 1400 FunFam ABC transporter C family member 5 805 1137 - -
Spst4g02264 1400 Gene3D ABC transporter type 1, transmembrane domain 204 531 IPR036640 GO:0005524|GO:0016020
Spst4g02264 1400 CDD ABCC_MRP_domain2 1154 1374 - -
Spst4g02264 1400 SUPERFAMILY ABC transporter transmembrane region 829 1138 IPR036640 GO:0005524|GO:0016020
Spst4g02264 1400 Gene3D - 553 798 IPR027417 -
Spst4g02264 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 544 768 IPR027417 -
Spst4g02264 1400 Pfam ABC transporter transmembrane region 230 489 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst4g02264 1400 Pfam ABC transporter transmembrane region 873 1104 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst4g02264 1400 SMART AAA_5 572 745 IPR003593 GO:0016887
Spst4g02264 1400 SMART AAA_5 1182 1375 IPR003593 GO:0016887
Spst4g02264 1400 CDD ABCC_MRP_domain1 545 745 - -
Spst4g02264 1400 SUPERFAMILY ABC transporter transmembrane region 214 526 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02264 Spst-Chr4 63424215 63429516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02264 533 801 Calmodulin-binding Proteins AT2G36910 27.000 2.35e-21 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02264 - - gmx:100790301 2292.31