Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst4g02263 | ATGGCCAACTTTTGGAATGCAATAGATATGCCACTATGCGTTTCTTTCATTTTTGTTGATTTTCATGAACAACTTATTAACTTTTCCAACTTCGAGTTGTTGCGTGTAAAATTGTTGATGATGATCTTGAATGGATATGCAGATGATTTCTCATGGCTTTGTCTCAAGGATTTTGATATCACTTCTTTCTGTTCACAAAGGACCACCATAGACACTATAAATCTAATTTTTGTCTGTGTCTTTTACGCTTCTACGATTATCAGTTTAATCAGAAGAAATTTTGCAAATGGAAGTCCTAGCAGAAGCAGGTTTTTCCTTTTTGTCTCAATCTGTTGTGCTATTACTAGCATTGTGTTTTACAGTATTGGCGTGTTGAATCTCATAGACAAAGCCGGTAATTCTATGGCTAACCATGTGAGCTGGTTAGCTTGCATTGTAAGAGGATTTGTTTGGACCTCTTTGACAGTTTCTTTGCTTGTTCAGAGACACAAATGGATCAAAATTTTAAACTCTGTCTGGTGGACATGTTCCTGTGCACTAGTTTCAGCTCTCGACACTGAAATTCTGTTTAGAAAGCATGTAATAGAAATTTTCGATGTCCTACTATGGCTCTTACACATGCTTCTTCTTTTTTGTGCCTTCCAAAATCTTGGTTACTTTGTCACTCAAAGTGTACCAAAAAAATTATCTGAGCCATTGTTAGCTCAGGAAGTTGACGCAGAAAAAACAGGACTAGGCCGTGCTTCCTTTCTGAGCAAGTTGACTTTTTCTTGGGTTAACTCCTTACTCAGTCTGGGTTACTCAAAGCCACTTGCCCTTGAAGACATCCCTTCCCTCCTTTCTGAAGATGAAGCAGACATGGCCTACCAAAACTTCATGCATGCATGGGAATCCCTTGTGAGGGAGAGAAGCAATAAGAACAATACCAAGAACTTGGTACTTCGGTCTATTGTTAGAACTCACTTAAAAGAGAACACATTAATAGCTTTTTACGCATTACTCAGAACCATTGCTGTGACTGTTTCTCCTTTAATACTCTATGCTTTTGTCAACTATTCAAATAGTAGGGATACCAGGGATACAGATCTCATGGAAGGTCTTACTATAGTGGGTTTTCTTATTGTGTCAAAAGTGGTTGATTCTGTGTCCCAGAGACATTGTTTTTTTAATTCCAGGAAGTCAGGATTGAAGATGAGATCAGCTCTGATGGTGGCAGTGTATAAAAAACAACTAAAGCTTTCGAGCTCAGCAAGGACAAGACACTCAACAGGTGAAATTGTGAATTACATTGCGGTTGATGCGTATCGCATGGGAGAATTCCCATGGTGGTTTCATATAACATGGGCATCTACTTTGCAACTTCTTCTATCTATTGGTATCCTTTATGGTGTTGTGGGAGTCGGTGCTCTTCTTGGTTTAGTCCCTCTTCTTATATGTGGACTTATCAATGTACCATTTGCAAAGTTCCTACAGAAGTGCATGGCACAGTTCATGATTTCACAGGATGAGCGTCTTAGAGCAACTTCAGAAATTCTAAATAACATTAAAATCATTAAGTTACAGTCCTGGGATGACAAATTCAAGAGTTTGGTTGAGAACCTACGTGATAAAGAGTTCATTTGGTTATCTAAGGCACAAATCGTGAAAGCTTATGGGACATTTCTATATTGGATGTCTCCTACCATCGTTTCTGCTGTTGTTTTCCTCGGTTGTGCTCTTTTCGATAGTGCTCCATTGAATGCTGGGACAATTTTTACAGTTTTGTCAACGTTGAGGAACTTGTCAGAACCTGTTCGAATGATTCCAGAGGCTCTATCTATTATGATCCAAGTTAAGGTATCCTTTGATCGTCTCAATACCATTTTGCTTGACGAAGAACTAGAGAGTAATGATGGTAACAGAAGATATATAAACCGAAGTTCAATTAATGGGGTAGAAATCCAAGCTGGCAACTTCATTTGGGACCACGAAGCAGTACTCCCAACGTTAAAAGATGTCAATTTAGAAATCAAATGGGGAGAGAAAGTTGCGGTTTGTGGGCCAGTTGGAGCTGGGAAATCGTCACTTTTGTATGCAGTACTTGGAGAGATTCCGAAGATTTCAGGATCTGTGAGATTTTACCCAAAATATGGAACAGTTCGAGACAATATACTCTTCGGCAAGCCAATGGAGAAAACAAGATATGCGAGTGCCATTAAAGTTTGTGCTTTAGATAAGGATATCAACGATTTTAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGTGCAGTCTACAATGATGCTGACATTTATCTCCTCGATGACCCTTTCAGTGCAGTTGATGCTCATACGGCCGCAATTCTGTTCAATGACTGCGTAATGACGGCTCTAAGAGAGAAAACAGTCATTCTAGTGACACATCAAGTGGAGTTTCTCTCCGAAGTTGATACAATCCTGGTGATGGAAGGTGGAAAAGTTACTCAATCAGGTAATTATGAAAGTCTCTTAGCAGCTGAGACGGCCTTTGAGCAACTTGTGAACGCTCATAAGGAAGCAATTACTGAGTGGGATCAAAATAATGAAAACAAAACTCAGAGAGAAGAGTCTCAAGGCTTTTATCTCACTAAAAACCAAAGCGAGGGGGAGATTTCCACCGAGGGCCAACCTGGGATACAGCTTACACAAGAAGAAGAAAAAGAGATTGGTGATGCTGGGTGGAAGACATTCTTGGATTATATTTCATTTTCCAGGTGTTCATTGATGCTGTCTTTGGTCATGTTGGCACAGGTTACTTTTATTGCTTTGCAGACTGCATCAATGCTTTGGCTTGCTCTAGCCATTGAAATTTCTAAAATAAATAGTGCCACCTTGATTGGGGTGTACTCCTTAATTTCATTTGCTAGTACTGCCTTTGTATATTTAAGGTCTCTCTTTACCTCTTACCTCGGATTAAAAGCTTCAAAAGCTTTCTTTACGAGTTTCACTAATTCTATCTTCAATGCTCCTATGCTGTTCTTTGACTCGACCCCTGTCGGAAGGATTTTAACTAGAGCTTCGTCAGATTTAAGTATTTTGGACTTTGATATACCTTATTCGATCACCTTTGTAGCATCCGTAATAATTGAAATTTTGGTGACAGTTTGTGTAATGGTTTTAGTAACATGGCCAGTTGTCATCGTCGCCATTCCTGCTTTAGTTGCATCAAAATTTGTTCAGGGATATTATCAAGCCTCGTCGAGGGAATTGGTGAGGATCAATGGAACCACAAAAGCTCCTGTGATGAATTTTGCAGCTGAGACATCACATGGTGTGGTTACTGTAAGAGCATTTAATATGGTAGAAAGATTTTTTAAGAAGTACTTAAAGCTTGTGGACACAGACGCAACACTGTTTTTTCATTCTAATGCGGCCATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACAGCCATCAGTTCGGCTGTATTGCTTATTCTATTTCCTCAGGAATACGTGTCCCCAGGCCTCGTGGGATTGTCTCTCTCTTATGCTTTAAGCTTGACAGGATCCCAAATATTTTTGACTCGATGGTATTGCAACTTACTGAACTATATTATCTCTGTTGAAAGAATCAAGCAATTCATTCACCTACCGTCAGAGCCTCCTGCCATTGTGAAGGAGCACCGGCCTCCATCCTCATGGCCTTCCAGAGGCAGAATTGATCTTCAAGCTTTAGAGATTAGGTATCGTCCTAATGCTCCATTAGTGCTTAAGGGTATCACTTGTACGTTTAGAGAAGGGAGTAGAGTGGGAGTTGTAGGAAGAACCGGAAGTGGAAAAAGTACACTCATAAGTGCTTTGTTTCGCTTAGTTGAGCCAGCAAGAGGTGATATTCTTATAGATGGGATTAACATATGCTCAATGGGGTTGAAGGATTTGAGAATGAAACTAAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACCAACTTGGACCCTTTAGGCCTGTACTCAGATGATGATATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGAAACTGTGAGCCATCTACCAAATCTCTTAGACTCTTTGGTGAGTGATGAGGGTGGAAATTGGAGCTTGGGGCAACGGCAACTGTTTTGTCTCGGAAGGGTACTGCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCAACTGCCTCCATTGACTCTGCCACAGATGCTATTCTACAGAGAATTATTAGAGAAGAATTTGCAGAATGCACAGTTATAACAGTGGCTCACAGGGTTCCAACTGTAATAGACAGTGACATGGTTATGGTCCTCTCCTTTGGGAAAGTGGTGGAATATGATGAGCCTTCAAGACTGATGGACACCAACTCTTCATTCTCCAATCTGGTAGCTGAATACTGGACCAGCTGCAGGAAGAATTCCTCCTCAAATTTTACTTGA | 4482 | 0.4027 | MANFWNAIDMPLCVSFIFVDFHEQLINFSNFELLRVKLLMMILNGYADDFSWLCLKDFDITSFCSQRTTIDTINLIFVCVFYASTIISLIRRNFANGSPSRSRFFLFVSICCAITSIVFYSIGVLNLIDKAGNSMANHVSWLACIVRGFVWTSLTVSLLVQRHKWIKILNSVWWTCSCALVSALDTEILFRKHVIEIFDVLLWLLHMLLLFCAFQNLGYFVTQSVPKKLSEPLLAQEVDAEKTGLGRASFLSKLTFSWVNSLLSLGYSKPLALEDIPSLLSEDEADMAYQNFMHAWESLVRERSNKNNTKNLVLRSIVRTHLKENTLIAFYALLRTIAVTVSPLILYAFVNYSNSRDTRDTDLMEGLTIVGFLIVSKVVDSVSQRHCFFNSRKSGLKMRSALMVAVYKKQLKLSSSARTRHSTGEIVNYIAVDAYRMGEFPWWFHITWASTLQLLLSIGILYGVVGVGALLGLVPLLICGLINVPFAKFLQKCMAQFMISQDERLRATSEILNNIKIIKLQSWDDKFKSLVENLRDKEFIWLSKAQIVKAYGTFLYWMSPTIVSAVVFLGCALFDSAPLNAGTIFTVLSTLRNLSEPVRMIPEALSIMIQVKVSFDRLNTILLDEELESNDGNRRYINRSSINGVEIQAGNFIWDHEAVLPTLKDVNLEIKWGEKVAVCGPVGAGKSSLLYAVLGEIPKISGSVRFYPKYGTVRDNILFGKPMEKTRYASAIKVCALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKVTQSGNYESLLAAETAFEQLVNAHKEAITEWDQNNENKTQREESQGFYLTKNQSEGEISTEGQPGIQLTQEEEKEIGDAGWKTFLDYISFSRCSLMLSLVMLAQVTFIALQTASMLWLALAIEISKINSATLIGVYSLISFASTAFVYLRSLFTSYLGLKASKAFFTSFTNSIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITFVASVIIEILVTVCVMVLVTWPVVIVAIPALVASKFVQGYYQASSRELVRINGTTKAPVMNFAAETSHGVVTVRAFNMVERFFKKYLKLVDTDATLFFHSNAAMEWLVLRIEALQNLTAISSAVLLILFPQEYVSPGLVGLSLSYALSLTGSQIFLTRWYCNLLNYIISVERIKQFIHLPSEPPAIVKEHRPPSSWPSRGRIDLQALEIRYRPNAPLVLKGITCTFREGSRVGVVGRTGSGKSTLISALFRLVEPARGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDDIWKALEKCQLKETVSHLPNLLDSLVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIREEFAECTVITVAHRVPTVIDSDMVMVLSFGKVVEYDEPSRLMDTNSSFSNLVAEYWTSCRKNSSSNFT | 1493 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst4g02263 | 1493 | SUPERFAMILY | ABC transporter transmembrane region | 919 | 1227 | IPR036640 | GO:0005524|GO:0016020 | |
Spst4g02263 | 1493 | CDD | ABC_6TM_ABCC_D1 | 327 | 618 | IPR044746 | GO:0140359 | |
Spst4g02263 | 1493 | CDD | ABC_6TM_ABCC_D2 | 929 | 1220 | IPR044726 | GO:0140359 | |
Spst4g02263 | 1493 | SMART | AAA_5 | 1271 | 1464 | IPR003593 | GO:0016887 | |
Spst4g02263 | 1493 | SMART | AAA_5 | 672 | 834 | IPR003593 | GO:0016887 | |
Spst4g02263 | 1493 | CDD | ABCC_MRP_domain1 | 645 | 834 | - | - | |
Spst4g02263 | 1493 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 933 | 1208 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Spst4g02263 | 1493 | Gene3D | ABC transporter type 1, transmembrane domain | 314 | 618 | IPR036640 | GO:0005524|GO:0016020 | |
Spst4g02263 | 1493 | Gene3D | - | 619 | 884 | IPR027417 | - | |
Spst4g02263 | 1493 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 647 | 857 | IPR003439 | GO:0005524 | |
Spst4g02263 | 1493 | FunFam | ABC transporter C family member 10 | 309 | 626 | - | - | |
Spst4g02263 | 1493 | Gene3D | ABC transporter type 1, transmembrane domain | 897 | 1226 | IPR036640 | GO:0005524|GO:0016020 | |
Spst4g02263 | 1493 | Pfam | ABC transporter transmembrane region | 327 | 591 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Spst4g02263 | 1493 | Pfam | ABC transporter transmembrane region | 949 | 1193 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Spst4g02263 | 1493 | SUPERFAMILY | ABC transporter transmembrane region | 314 | 626 | IPR036640 | GO:0005524|GO:0016020 | |
Spst4g02263 | 1493 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 247 | 1481 | - | - | |
Spst4g02263 | 1493 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 327 | 610 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Spst4g02263 | 1493 | ProSitePatterns | ABC transporters family signature. | 759 | 773 | IPR017871 | GO:0005524|GO:0016887 | |
Spst4g02263 | 1493 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 643 | 857 | IPR027417 | - | |
Spst4g02263 | 1493 | Pfam | ABC transporter | 1262 | 1410 | IPR003439 | GO:0005524 | |
Spst4g02263 | 1493 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1247 | 1479 | IPR003439 | GO:0005524 | |
Spst4g02263 | 1493 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1236 | 1478 | IPR027417 | - | |
Spst4g02263 | 1493 | FunFam | ABC transporter C family member 3 | 1228 | 1479 | - | - | |
Spst4g02263 | 1493 | Gene3D | - | 1228 | 1479 | IPR027417 | - | |
Spst4g02263 | 1493 | Pfam | ABC transporter | 663 | 786 | IPR003439 | GO:0005524 | |
Spst4g02263 | 1493 | FunFam | ABC transporter C family member 5 | 894 | 1226 | - | - | |
Spst4g02263 | 1493 | CDD | ABCC_MRP_domain2 | 1243 | 1463 | - | - | |
Spst4g02263 | 1493 | FunFam | Multidrug resistance-associated protein 4 | 631 | 874 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst4g02263 | Spst-Chr4 | 63408964 | 63414764 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst4g02263 | 641 | 890 | Calmodulin-binding Proteins | AT2G36910 | 23.891 | 6.96e-16 | 82.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst4g02263 | - | - | gmx:100784827 | 2355.87 |