Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02261 ATGCAGGGTGAAATTGAGGGTGAACTTTCAAGGAATTGTCAAGGCACATGCTTGGATGGTGGTTCAGAGTTGAATCTTTTAAGCAAGGAAGTTCTTGAAGCACTATTGTTGGTGCTGATGAGTCGTGAGCAACAGAAGCGGGGGAAGCAAGAGAAAGGTTCTGATGGTGCTGAGAAGGTCATTGTTGCCGTTAAGGCATCAAAAGAAATTCCAAAGACTGCTCTTGTTTGGTCCCTTACTCATGTTGTTCAACCTGGGGATTGCATTATACTGCTAGTGGTTGTGCCTTCACAAAGTTCAGGTAGAAGATTATGGGGTTTCCCGAGATTTGCTGGTGACTGTGCCAGTGGTATTAAGAAGTACCCTCCAGGAACAATATCAGAGCAGAAGAGTGATATCACTGATTCTTGCTCTCAGATGATCCTTCAACTCCATAACGTCTATGATCCAAACAAGATCAATGTCAGGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCAGCAGAAGCCAAGAAAGCACAAGCCAATTGGGTCGTTTTAGACAAACAGCTCAAACATGAGGAAAAGCGATGCATGGAAGAACTACAATGTAACATTGTGGTTATGAAGCGTTCTCAACCAAAAGTACTGCGGTTGAATTTGATTGGACATAAGAAGAAAGATGTTGAAGAAGCAGGTCCATCACCTTCTGAGAAAGATGACATGTCTGAAAAGCGAAGCAAAATAAAGCTTGATTCCTTAAATTCAATCAAAGGACCAGCTGTAACTCCATCTAGCAGCCCTGAGCTAGGGACACCATTCACTGCAACCGAAGCCGGTACTTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCTTTCTTCATCTCAGAGATGAATGGTGAGTCCAAAAAAGAGGAAACTATCCAGGAAAGTCAAGAGCTCGTTGATACTAATTCAGACACAGAAAGTGAAAGTCTGTCCACATCTTCAGCAAGCATGAGATACAAGCCATGGATCACAGAAATGCTTTTACATCAACAATCATCCCAACGCAATGAAGAGAGATCCGAGATATCTCATGGTATGCCTCAAGCATCAACAACCAGAGCTTTCCTAGATAAATATTCTAGGCTTGATAGAGGAGCTGGATTTGAAATCTCAACGTATAGAAATGACTTGGATTTCAGTGGAAATTTGAGAGAAGCAATAGCATTATCTGGAAATGCACCACCTGGTCCCCCTCCACTGTGTTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGTTAGAACTTGCTACTGGTGGTTTTTCGCAGGCCAACTTCTTGGCTGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTACCAGAAGGACAAGTCATTGCTGTCAAGCAACATAAATTAGCTAGTTCTCAAGGTGATCTTGAATTTTGTTCAGAGGTTGAAGTCCTGAGCTGTGCTCAGCACCGGAATGTTGTTATGCTCATTGGGTTCTGTATAGAAGATAAGAGAAGGCTACTAGTTTATGAGTACATATGCAATGGATCATTGGATTCGCATTTATATGGGCGACAAAAGGATACATTAGAATGGCCTGCACGGCAAAAAATTGCTGTGGGAGCAGCTCGTGGGTTACGATATCTTCATGAAGAGTGTAGAGTGGGTTGTATTATCCACCGTGACATGAGGCCAAACAACATTCTCATAACTCATGATTTTGAACCTCTGGTTGGTGATTTTGGACTGGCGAGGTGGCAGCCTGATGGAGACACAGGTGTGGAAACAAGAGTGATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTATTAGTTGAGCTTGTGACAGGGAGAAAAGCTGTGGATCTCACTAGGCCAAAGGGACAGCAGTGCCTAACCGAGTGGGCACGACCTCTGTTAGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTTGCTAACCAATATTCAGAACACGAGGTCTATTGCATGCTGCATGCTGCCTCATTATGCATACAGCGAGACCCTCAATATAGACCACGCATGTCACAGGTTCTCCGAATACTAGAGGGTGACATGGTGATGGACACAAATTACCTCTCAACGCCAGGCTATGATGCAGGAAACCGAAGTGGTAGACTCTGGTCAGAGCCGTTACAAAGGCAGCACCATTACAGTGGTCCCCTATTAGAAGAGTCTCTGGAGTGCTTCAGTGGGAAGCTATCCATTGACAAGTACAAGCCTTCGTATTGGGGTGATAGGGACAAGGCTAGGAGGGCCTCATGTGAAGATGACATTTGA 2370 0.4414 MQGEIEGELSRNCQGTCLDGGSELNLLSKEVLEALLLVLMSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCIILLVVVPSQSSGRRLWGFPRFAGDCASGIKKYPPGTISEQKSDITDSCSQMILQLHNVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGHKKKDVEEAGPSPSEKDDMSEKRSKIKLDSLNSIKGPAVTPSSSPELGTPFTATEAGTSSVSSSDPGTSPFFISEMNGESKKEETIQESQELVDTNSDTESESLSTSSASMRYKPWITEMLLHQQSSQRNEERSEISHGMPQASTTRAFLDKYSRLDRGAGFEISTYRNDLDFSGNLREAIALSGNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQKDTLEWPARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLANQYSEHEVYCMLHAASLCIQRDPQYRPRMSQVLRILEGDMVMDTNYLSTPGYDAGNRSGRLWSEPLQRQHHYSGPLLEESLECFSGKLSIDKYKPSYWGDRDKARRASCEDDI 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02261 789 MobiDBLite consensus disorder prediction 253 293 - -
Spst4g02261 789 ProSitePatterns Tyrosine protein kinases specific active-site signature. 563 575 IPR008266 GO:0004672|GO:0006468
Spst4g02261 789 MobiDBLite consensus disorder prediction 222 241 - -
Spst4g02261 789 Pfam Protein tyrosine and serine/threonine kinase 446 711 IPR001245 GO:0004672|GO:0006468
Spst4g02261 789 ProSiteProfiles Protein kinase domain profile. 442 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02261 789 PANTHER OS01G0750732 PROTEIN 195 720 - -
Spst4g02261 789 Gene3D Transferase(Phosphotransferase) domain 1 518 723 - -
Spst4g02261 789 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 518 721 - -
Spst4g02261 789 SUPERFAMILY Protein kinase-like (PK-like) 426 721 IPR011009 -
Spst4g02261 789 MobiDBLite consensus disorder prediction 308 326 - -
Spst4g02261 789 Gene3D Phosphorylase Kinase; domain 1 414 517 - -
Spst4g02261 789 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 414 517 - -
Spst4g02261 789 MobiDBLite consensus disorder prediction 246 326 - -
Spst4g02261 789 CDD STKc_IRAK 448 714 - -
Spst4g02261 789 FunFam Dual-specific kinase DSK1-like 51 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02261 Spst-Chr4 63389565 63394698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02261 422 731 Trihelix Transcription Factor Family AT1G70460 50.938 1.75e-99 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst4g02261 PK_Tyr_Ser-Thr 2.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02261 - - gmx:100816340 1436.78