Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02247 ATGACCGACAATGGTGAAGTGGCCCTGCATGTTGCTCTCATGACTTTGTTGTGCTTGTCCTTAGATGTGACATGCATAGTTGTTGATCTAGTTTTCCTCCAGGAGAAAATGGGGCTGCAGCTAATTTTCCTGCTAATTGAGCTGCATTTGGTTGTCTGCACTCAGCAGGTTCATGAATATGCAGCCACCAATCTGCAACATTCCGGTGACAGAAGCCATTTTAGTATTGCAATCCCACCATCAAAGTCATCTTCTGAAGGTCATTCAAGTATTGCACATCCACCTTCCAAGTTTTCTTCAGGGGTACCTTCAAGCATTGCGCTTTCACCTTCCAAGTCAGTTCACAAAGCTCCTACAATTATATGGACACATGGTTCTGTGGATTCCCCAATCTCACATCTTAAGCATCACTATTCAAAAAGAAAGTCCAACAATCCAACTATAGCACCAATCTACCCAGTCCAGGCTCCTACATACAACCATCAAGGTCCTTCAGTCTTCAAATCACGACCTCCTTTCTTTTCACCAAATATTAAGGATATTCATGCCCCAGCCCTTGCACCATCACCAGCTATTGTGCCTGGTCACCTGGATGTACCCTCTACTTCCCCCAGAATTTCTCCTCTAGGTTCATCACTGCAGAGGAAAAAGACTCCACCACCAGCATATGAATTGGTTCTGCCACCTCCACCTCCTAATAAAGATTGCTTGTCGACAACTTGCTCAGAGCCCTTGACATATACACCTCCTGGGTCACCTTGTGGTTGTGTATGGCCGTTTCAGGTTAAACTCGATATCAACATTGCAATTTACAAGTTTTTTCCATTGGTCGCAGTGCTAGCAAAGGAAATTGCTGCGAGTGTTTTGCTGAACCATACTCAGGTTCGCATAGTGGGTGCTGATGCAGCTAGTCAGCAATTAGAGAAAACCATTGTTCTCATAGACTTAGTACCTAAAGGTGTAAAATTTGATGATACCACCGCATTTATAATATATAAGAAATTCTGGCGCAGGGAGATTCTGATAGATACTGCAGTCTTTGGTGCTTATGAAGTACTCTATGTTCAGTATCCAGGTCTTCCACCATCTCCCCCTTCAAGTCCCTCAGATGCTTCTGTTACAGATGGTGAGCCAAATCCAGGACATGACAACAATGGAGTGATGATGAAACCTTTAGGAGTAGACATCCCAAAGAAGAAAAAAGAAGGGAGTAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACTGGTTTTGTTGTATTCCTTGGTCTTGCTTGGATTTGTGTGCTGAAATGCCGTGCCCATGTTCATGAACATGAATCAGTTCCAGATGGCTTAATTTCATCCTCTTCAAAACAATCAAGGGCTGCTAGGTCATTGGCTCACGGAATCAGGTCAGGTTCTGGATCACAGTCCTTCAATTCTGGAACAATAACATATACAGGGTCTGCTAAGATTTTTACTTTGAATGACTTAGAGAAAGCGACGAATAACTTTGATTCTTCGAGAATATTAGGAGAAGGTGGTTTTGGACTTGTTTACAAAGGTGTTCTAAATGATGGGAGGGATGTTGCCGTGAAGGTTCTCAAAAGAGATGATCAGCGTGGTGGTCGTGAATTCCTGGCAGAAGTTGAGATGCTTGGCCGCCTACACCATAGAAATTTAGTTAAATTGTTTGGTATCTGCATTGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGATCTGACAAGAAAACTGATCCACTGGATTGGAATGCGCGGATGAAGATTGCTCTTGGTGCAGCTCGAGGATTGGCCTATCTGCATGAAGATTCAAATCCATGTGTCATACATCGCGATTTCAAGGCAAGCAACATCTTGTTGGAGTATGATTTTACACCCAAGGTCTCAGATTTTGGATTGGCTAGAACAGCACTGGATGAGAGGAACAAGCACATCTCCACACATGTTATGGGCACATTTGGCTACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGATTTGTCACAACCACCAGGTCAAGAAAATCTTGTGACATGGGCTCGTCCACTTCTCACGAGTAAGGAGGGTTTGCAGATGATCATAGACCCAGTTGTAAAGCCGAACATTTCTGTTGATACTGTGGTCAAAGTTGCAGCAATTGCTTCCATGTGTGTGCAACCAGAAGTCTCACAACGTCCTTTCATGGGAGAAGTTGTTCAGGCCTTGAAGCTGGTGTGCAGTGAGTTTGAGGAAACAGACTATTTAAGATCAACGAGTTATCAAGAGGGTCTACTAACTGATGTCGAAGGAAAGTTTTCTGAAACTTCAGGTGAAAGAGTAGAATTTTCAGAGTATCAAAAAACTCTTTCTGGCTATCAATCTGGTGAAGAAAAGGTAGAATTATCAGCATCAGAGTTGCTCGGTACCACAGGTCAGGAATTTGAGTCATTCAGGAGGTATTCTCGATCAGGGCCTCTAACTATTGGGAAGAAAAGGCAGTTCTGGCAGAAGTTGAGAAGTTTGTCTAGAGGTAGTACCAGTGAACATGGATTTTCAACTAAACTATGGCCTGGATCCCATTAA 2679 0.4315 MTDNGEVALHVALMTLLCLSLDVTCIVVDLVFLQEKMGLQLIFLLIELHLVVCTQQVHEYAATNLQHSGDRSHFSIAIPPSKSSSEGHSSIAHPPSKFSSGVPSSIALSPSKSVHKAPTIIWTHGSVDSPISHLKHHYSKRKSNNPTIAPIYPVQAPTYNHQGPSVFKSRPPFFSPNIKDIHAPALAPSPAIVPGHLDVPSTSPRISPLGSSLQRKKTPPPAYELVLPPPPPNKDCLSTTCSEPLTYTPPGSPCGCVWPFQVKLDINIAIYKFFPLVAVLAKEIAASVLLNHTQVRIVGADAASQQLEKTIVLIDLVPKGVKFDDTTAFIIYKKFWRREILIDTAVFGAYEVLYVQYPGLPPSPPSSPSDASVTDGEPNPGHDNNGVMMKPLGVDIPKKKKEGSNGRMIVIIVLSSVTGFVVFLGLAWICVLKCRAHVHEHESVPDGLISSSSKQSRAARSLAHGIRSGSGSQSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRILGEGGFGLVYKGVLNDGRDVAVKVLKRDDQRGGREFLAEVEMLGRLHHRNLVKLFGICIEKQTRCLVYELVPNGSVESHLHGSDKKTDPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWARPLLTSKEGLQMIIDPVVKPNISVDTVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEETDYLRSTSYQEGLLTDVEGKFSETSGERVEFSEYQKTLSGYQSGEEKVELSASELLGTTGQEFESFRRYSRSGPLTIGKKRQFWQKLRSLSRGSTSEHGFSTKLWPGSH 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02247 892 FunFam receptor-like serine/threonine-protein kinase ALE2 474 576 - -
Spst4g02247 892 MobiDBLite consensus disorder prediction 76 104 - -
Spst4g02247 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Spst4g02247 892 PANTHER OS01G0750732 PROTEIN 228 796 - -
Spst4g02247 892 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Spst4g02247 892 MobiDBLite consensus disorder prediction 363 392 - -
Spst4g02247 892 Gene3D Phosphorylase Kinase; domain 1 473 576 - -
Spst4g02247 892 CDD STKc_IRAK 507 775 - -
Spst4g02247 892 Pfam Protein tyrosine and serine/threonine kinase 504 774 IPR001245 GO:0004672|GO:0006468
Spst4g02247 892 Gene3D Transferase(Phosphotransferase) domain 1 577 794 - -
Spst4g02247 892 SUPERFAMILY Protein kinase-like (PK-like) 480 774 IPR011009 -
Spst4g02247 892 ProSiteProfiles Protein kinase domain profile. 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02247 892 FunFam Receptor-like serine/threonine-protein kinase ALE2 577 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02247 Spst-Chr4 63259323 63267366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02247 233 887 Receptor kinase-like Gene Family AT5G56890 60.332 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Spst4g02247 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02247 - - gmx:100814040 1479.54