Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02243 ATGCAGCCGAAATCTCACACCCCTTTTTTTGTTCCTCCCCAAAAGGCCATGAACAACAATAACAAAGCCACCAACACCAACACCAACAACAGAATCTCAACAACAAGAAATGGCAACAGCACCACGCAAGCTTGCGCTGCATGCAGGTACCAACGCAGAAAGTGTGCACCTGACTGCATTCTCGCACCCTATTTCCCACATGATCGCCAGCGCCAATTCTACAACGCTCACAAGTTGTTTGGTGTAAGCAACATCACCAAAATCATCAAGGTTCTCAGCCCTCACGACAAGGACCAAGCCATGCGCACCATCATCTACCAATCCGACATGCGTGCCACTGACCCTGTTGGAGGCTGCTATAGGTACATTCTCGACCTTCAGGCTCAGATCGAGTACTGCCGAGCCGAGCTCGAACTCGTCCTTCAACAACTCGCCATGTTTCGAGCTCAGGCTCAGCACCAGAATCAGCAACAGTTTCAGCACCAACACGGTATCTATGCTCCAAACAATGTTAACGTCACTGTCCATGGAGACGGTGAGGTTTTGAACGCTGACCCCATGGGCTTGTATAACCAGCAGCAACAGTATCATTGCCTGCAGCCTCAACAACAGGAGCAGTATGTTATGATGCATGAAAATGGGCATGGCGCCCATAACTGCAACGGCGCCACTCCTTTGCAGGACCAGATCAACACTTGGGCTGTGCAGAACACTGCTGTGTCTCTTTCTTCGTTGTCATTGCAAGGACAGAGTAGTAATGTTAGTGATGAGTATGACCACAAGCCCGTCATTGACATAGATTCTGATGAGAGAAGTGAGTTAGGGTTCGAGTCTGAAGATTTAGTCCATCGCAGTGATGAAGCAGTGCTGTTTAAGATAGAGGATGCAGTAATAAAAGGGGAGGGTGACTGCATGCAACAAGCTCAAGACCATGACCTGAAAGGTGCAGCAACATCGTTTACCCTCACAAATTGTACTTGCTGA 984 0.4878 MQPKSHTPFFVPPQKAMNNNNKATNTNTNNRISTTRNGNSTTQACAACRYQRRKCAPDCILAPYFPHDRQRQFYNAHKLFGVSNITKIIKVLSPHDKDQAMRTIIYQSDMRATDPVGGCYRYILDLQAQIEYCRAELELVLQQLAMFRAQAQHQNQQQFQHQHGIYAPNNVNVTVHGDGEVLNADPMGLYNQQQQYHCLQPQQQEQYVMMHENGHGAHNCNGATPLQDQINTWAVQNTAVSLSSLSLQGQSSNVSDEYDHKPVIDIDSDERSELGFESEDLVHRSDEAVLFKIEDAVIKGEGDCMQQAQDHDLKGAATSFTLTNCTC 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02243 327 MobiDBLite consensus disorder prediction 14 36 - -
Spst4g02243 327 ProSiteProfiles LOB domain profile. 43 144 IPR004883 -
Spst4g02243 327 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 42 191 - -
Spst4g02243 327 Pfam Lateral organ boundaries (LOB) domain 44 139 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02243 Spst-Chr4 63187636 63189226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02243 43 161 AS2 family AT3G13850 73.950 1.75e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst4g02243 LOB 1.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02243 - - vum:124830493 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00275 5 2397173 2400075 Spst4g02243 4 63187636 63189226 PCT