Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02226 ATGTCATCATCCTTTGCAGAAAAGCACGATGTTTTTCTGAGCTTCAGAGGAGAGGACACGCGAAGCAACTTCACAAGCCATCTTTACACTGCTCTGCTTCAGAAATCAATCACCACATTCATAGATTACAAACTCATCAGAGGAGACTACGCTTGGCCAACCCTTTCCAGAGCGATCGATGAGTCTGTAGTGTCAATTGTTGTTTTCTCAGAAAACTATGCTTCCTCGACGTGGTGCTTGAAAGAACTTGTGCACATACTCGAATGCAGAAGAAAGCGGGGTCTTGTTGTTATACCCGTCTTCTACAAAGTAGATCCCACGCACATAAGGAAGCTGCGTGGGAGCTACGAAAAGGCATTCGCAAAGCATGAGCGAGACCCCACATTGTCCAATCGCAAATCCCACCGGCAGGACGTTTCCAGGTGGAAAGCTGCTCTCAAAGAAGCATCCAATATTTCTGGATGGGACTCAAGATCATACAGGAAAGATCATGTCATAAGGATATTAGATGCCTGTGGTTTTGAGGCAACTAGTGGAGTAGATGTTCTTGAAGACAAAGCTTTGATTACTATTTCAAATAGAAATATAATACAAATGCATGACTTGCTGCTAAAAATGGGTTTGGAGATAGTACGTCAAGAGAGCAGTGGGCATCCTGGAAGTCGTAGTCGATTGAAGGATGATGAAGCTAGGGAAGTGATTGAACAAAACGAGGGAACTGGTGCAATTCAAGGAATAGCACTAGATTTGTCTCAAATTAAAGGTTTAATTTTGTATGCTGACACATTCACAAAGATGAAAACCTTAAGATTTCTGAAATTCTACACCAGTTTGGGTGAGAGTGCTAGTGATACATACCTTGACCTTCCCACAACTCTTGACCCATTTTCTGATAAACTGAGGTACATTGAGTGGATTGGATACCCTTTTGAGTCTCTTCCATCACCTTTTTGTGCTAAGTTTCTCGTGGAGATTCACATGCCACGCAGCAAAGTTAAACAACTTTGGCAGGGGATCCAGGAGCTTGATAATTTAGAAGGAATTGACCTAAGACAATGCAAACAGTTTGAGGAGCTTCCAGATTTGTCTAAGGCGCCAAGACTTAAATGGGTGATTCTCACCGGTTGTGAAAGTTTGCAGTATCTTCATCCATCTGTTTTATCCTCAGACACGCTTGTTACTTTGATACTGGATAGGTGTACAAACCTTAAGAGAGTTAAAAGTGAGAAACATTTAAAATCTCTAGAGAAGATCAGTGTCAATGGCTGCTTAAATCTGGAGGAATTTGCAGTTTCATCAGATTTAATTGAAAACTTGGATTTAAGCAATACAGGAATCCAAACATTGGACACATCAATAGGGAGTATGTATAAACTTAAGTGGCTCAATCTGGAGGGCTTAAAACTCAAGCATCTTTTGAAAGAGTTATCATGCTTGACATCTCTCAAGGTGCTGAAGATTTCTGATAATGGACTAGTAATGGACAAACAGAAAATACATGTTCTATTTGATGGATTAAGGTACTTAGAAATACTATATTTGAAGGATTGTAGTAAGCTGTTTGAACTCCCCGACAACATCAGTTTCTTAACACAATTAAGAGAACTAAGGTTAGACAGAAGCGATGTGAAAAGGTTGCCTGAAAGCGTTAAGAATCTTCACAAGTTGGAAATTCTGTCCTTGGAGAATTGCAAGGAGCTTTTTTGCCTTCCAAAGTTTCCATCCCTCATCAAATACTTACGTGCCATTAACTGCACGTCATTGGTGTCAGTGTCAAACTTGAAGACTTTGGCAACAGAGATGTTAGGAATGACCAAACGCATTACATTCAAGAACAGCTGCCAATTGGATGGACATTCACTCAAACTTATTATGGAAAGCCTCCATTTAACAATGTTGAGTGCTGCATATCACAATGTGTTAGTAAGAAGATCATATGGGTCGTACCACAGCTACAACTATACAGCTGTTGAGCTTTGTTTACCAGGAGGGAGTGTCCCTGAGAAGATCCATTATCGATCTACTAAGTCCTCCATTACCATTGTACTTCCTCCACGTTCTGACTTACTGGGCTTCATTTACTCTGTGGTTCTTTCTCCAGCTGGTGGAAGGAAGACTTATGGCACTAAGATAAATTGTAAATGCCACTTGCCAGAAGAAGGTATAATGGAAACATGGCTATATAGTGATATCAGGGAATTGAAGTCGGATCATGTTTATGTATGGTATGATCCATTACACTGTGACAGCATTCTCAAATATCATGAACGACCAAAGGTTTTTTTTGAGTTCAATGTTGCAAATGATAAGGGGGAAGTTGACGGTTCCATTTGTATTGAAGAGTGCGGGGTAGGCCTAGTAAGTGTTTCAGAGGTGGAGAGTGTTTTACAAGAGTTGGACTTTGATTCCGATAAGAAAAAGGAGTTGATGGAGGGAGTGGAGTTGGAATCAAAATTAGGGAATCAACAGCGAGATTGGAGTGAATGGAGTTCCTCTGACAGTCCAACATCTCTAACCAGCTCCTCTGAGTCGGATTCAGAGATGGTTGAACCAGATTTAGCTGAAAAAGGTAAATATACTCACAAGGAAACGAAAACTGATTCTGGAATAAATGCGGTCAAACACGAAGGTAATAAAGAAGCTCCAATCAAATCAGATGCAACATTGCATGAGACCGTCGAGTCACATTCAGACAATGAAAACAAGTTCAGAGAAAAGTCAATTACACAATCAAAGGTAGCAGTGATGGTTGAACTAGAGACTGAATCTACTTGCAAGGAAACCCAGAGCACTGCTAAAAGACATCCCAAAGAGGAATCCACAGAGTCTACACAAGTTGATAAAATCAGATTAAGTGAAAGAAAGCGAACTGAATCCGATGTTGGATTGCATCAACCTACGGTGTCAGTTAATGAATCTAATGCTTCTAAGGAGGATAATTCAAGTGAAATTAACTGTGACTGGCCAGATACCAATATTCAAGAGGTTAATTATTCAGAAGCAAATGAATACCTACATGCAGGAGAAATCTTAGTTCATCATGACATTCATGATGTCAATGTTGCTGAAGAACCAAACCATGAAAATGAAAGGGAAAACAGAGGAACTGATCATTGCTTCCGAGCTGAAGGAGAAGATGGATCAGATGAGGACCCTTTTGCTGAACTTGATAGCATCCTGTTGAGAAGTCCCAAGTCCTCAGCAAAAGCAACATCTACAACCGATGTGGCTGTAAGTGAAGCTTTGCATAATCTTAATTTCCTACTGGAGAACTCACTTGATTGCATTCTCGGTGACACTGAACTACAACAAGAATTACTCACCACTTTGGAATTCATAAAAGAGGCATCCCAGGAAAAAGTTTCTCCTAATGTTGCAAAGCTGGTTGAAGGAATAACTTCCTCTATTGATTATCTATTCAAGGACTTTCCCTCGACTCAAAACGTAGTAGAAGCTCACACAAGCCATTTGCTACAAAAGCAAAAACTTGTACAGCAAGTGAGAGATGCTAAGAAACAGAAAGAATTATTGAACAAAGAAATGCGTCAATATAGGTTTGAAACTGAACGGCTTGGCAAGAAGGCTGAAAAGCTGGATGAAATGATTCAACTTTTTACTGAACAAAAGAAAAGTGTTGAGTTGAAAAGGGCCAAGTTGAAGGAGACTCTGGAAAAATGTGAAGGTGAAAAGAAGAAACTGAAACAAGAGGCTAAGAATAAGGTAACTGAAAGCAAAGAGATAATGTTGGTGATTGAGAATTCTAAAGCCTCGTATGATGCTGCCCTGTCCAAGCAGCAGATGTTGAATGATAAATGGGAAGGTTTCAGAACAGCTTTTGCAGACAACTGTGGGACACTGGTAGCTCATGACAGCTGA 3876 0.4022 MSSSFAEKHDVFLSFRGEDTRSNFTSHLYTALLQKSITTFIDYKLIRGDYAWPTLSRAIDESVVSIVVFSENYASSTWCLKELVHILECRRKRGLVVIPVFYKVDPTHIRKLRGSYEKAFAKHERDPTLSNRKSHRQDVSRWKAALKEASNISGWDSRSYRKDHVIRILDACGFEATSGVDVLEDKALITISNRNIIQMHDLLLKMGLEIVRQESSGHPGSRSRLKDDEAREVIEQNEGTGAIQGIALDLSQIKGLILYADTFTKMKTLRFLKFYTSLGESASDTYLDLPTTLDPFSDKLRYIEWIGYPFESLPSPFCAKFLVEIHMPRSKVKQLWQGIQELDNLEGIDLRQCKQFEELPDLSKAPRLKWVILTGCESLQYLHPSVLSSDTLVTLILDRCTNLKRVKSEKHLKSLEKISVNGCLNLEEFAVSSDLIENLDLSNTGIQTLDTSIGSMYKLKWLNLEGLKLKHLLKELSCLTSLKVLKISDNGLVMDKQKIHVLFDGLRYLEILYLKDCSKLFELPDNISFLTQLRELRLDRSDVKRLPESVKNLHKLEILSLENCKELFCLPKFPSLIKYLRAINCTSLVSVSNLKTLATEMLGMTKRITFKNSCQLDGHSLKLIMESLHLTMLSAAYHNVLVRRSYGSYHSYNYTAVELCLPGGSVPEKIHYRSTKSSITIVLPPRSDLLGFIYSVVLSPAGGRKTYGTKINCKCHLPEEGIMETWLYSDIRELKSDHVYVWYDPLHCDSILKYHERPKVFFEFNVANDKGEVDGSICIEECGVGLVSVSEVESVLQELDFDSDKKKELMEGVELESKLGNQQRDWSEWSSSDSPTSLTSSSESDSEMVEPDLAEKGKYTHKETKTDSGINAVKHEGNKEAPIKSDATLHETVESHSDNENKFREKSITQSKVAVMVELETESTCKETQSTAKRHPKEESTESTQVDKIRLSERKRTESDVGLHQPTVSVNESNASKEDNSSEINCDWPDTNIQEVNYSEANEYLHAGEILVHHDIHDVNVAEEPNHENERENRGTDHCFRAEGEDGSDEDPFAELDSILLRSPKSSAKATSTTDVAVSEALHNLNFLLENSLDCILGDTELQQELLTTLEFIKEASQEKVSPNVAKLVEGITSSIDYLFKDFPSTQNVVEAHTSHLLQKQKLVQQVRDAKKQKELLNKEMRQYRFETERLGKKAEKLDEMIQLFTEQKKSVELKRAKLKETLEKCEGEKKKLKQEAKNKVTESKEIMLVIENSKASYDAALSKQQMLNDKWEGFRTAFADNCGTLVAHDS 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02226 1291 MobiDBLite consensus disorder prediction 962 988 - -
Spst4g02226 1291 Pfam Leucine Rich Repeat 321 340 IPR011713 -
Spst4g02226 1291 MobiDBLite consensus disorder prediction 927 961 - -
Spst4g02226 1291 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 155 IPR035897 -
Spst4g02226 1291 MobiDBLite consensus disorder prediction 1024 1047 - -
Spst4g02226 1291 MobiDBLite consensus disorder prediction 1024 1052 - -
Spst4g02226 1291 Coils Coil 1195 1243 - -
Spst4g02226 1291 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 438 585 IPR044974 GO:0006952
Spst4g02226 1291 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 171 - -
Spst4g02226 1291 MobiDBLite consensus disorder prediction 922 988 - -
Spst4g02226 1291 Coils Coil 1160 1187 - -
Spst4g02226 1291 Gene3D Ribonuclease Inhibitor 243 433 IPR032675 -
Spst4g02226 1291 Gene3D Ribonuclease Inhibitor 434 611 IPR032675 -
Spst4g02226 1291 MobiDBLite consensus disorder prediction 817 906 - -
Spst4g02226 1291 MobiDBLite consensus disorder prediction 820 847 - -
Spst4g02226 1291 Pfam TIR domain 8 153 IPR000157 GO:0007165
Spst4g02226 1291 MobiDBLite consensus disorder prediction 849 906 - -
Spst4g02226 1291 SUPERFAMILY L domain-like 199 591 - -
Spst4g02226 1291 Gene3D - 6 172 IPR035897 -
Spst4g02226 1291 ProSiteProfiles TIR domain profile. 7 172 IPR000157 GO:0007165
Spst4g02226 1291 SMART till_3 8 152 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02226 Spst-Chr4 62975087 62982017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02226 506 601 WRKY Transcription Factor Family AT4G12020 32.292 9.48e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02226 - - vun:114165831 1217.22