Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02225 ATGAGAGAGAAAGAGAAAGAGAGTCTCACATCATACCCACACTCTCTCTTCTTCTTTCCCTCCTCTGATGCCAGCAATTTCCGTGGGGGAATGAGTTCCTCCACGAAAAAGCACGACGTGTTTGTGAGCTTCAGAGAAGACACACGATCCAGGGTTGATGAGACATACGATGTTCAGGAATGGAAAAAGACAGAATCTCTTGAGCTTTTTTGCTCAGAAGCCTTTAAGAAAAGTTATCCAGAAAGAGGCTATGAGAGTCTATCAGATAGTGCAGTTAAATATGCTGGGGGAGTTCCATTAGCTCTTAAAGTTCTGGAAAAAGATAGAGATCATGTCATAAGGATACCAGATGCCTGTGATTTTGAAACAACTAGTTTAATAGAAGTTCTCGCAGACAAAGCTTTGTTAACAATTTCGTATGGGAAGATAATACAAATGCACGACTTGCTGCAACAAATGGGATTGGAGATTGTATGTCAAGAATGTACCGTATATCCTGGCAGACGTAGTCGCTTGAAGGACAATGAAGCTCGTGAAGTGATTGAAGAAAACAAAGATTTGTCTCAAATTAAAAATTTACGTTTGCATTCGGACACATTGACAAAGATGAAAACCTTGAGATTTATGAAATTTTATAACTCCTCGGGTCAGAGTTCTAGTAATACATATATCGACCTTCCTGCAACGCTTGAACCATTTTCTGATAAACTGAGGTACATTGATTGGATTGGATACCCTTATGAGTCTCTTCCATCACCTTTTTGTGCTAAGTTTCTTGTTGAGATTCACATGCCACACAGCAAAGTTAAACAACTTTGGCAGGGGATTCAGGAACTAGCTAATTTAGAGGGAATTGACCTAAGTGGATGCAAACAATTTGAAGAGCTTCCAGATTTGTCTAAGGCACCGAGACTTAAATGGTATCTTCATCCATCTGTTTTATACTCCGATACTCTTGTTACTTTGATACTGAATGGGCGTACAAAACTTCAGGGTGTTAAAGGTGAAAGACATTTAAAATCTCTAGAGCAGATCAGTGTCAATGGCTGCTTAAGTCTGGAGGAATTTGCAGTCGACAGAGAAATCCAAACGTTGGGAGCATCAGTAAGGCGTAAACGCAATGTTATGAAGCTCCATGTAGAGGGTTTAAGAGTCAGCCATACTTTAAAGGAGTCATCTGAACCCACCAACCACCCTACTTCCTTACCAAATTTATACGAGCTAAATCTATATCGATGCAATGTCAAAAGGTTTCCTGAAAACTTCGATATTCTTGAAAACTTGAGAATTCTGTCCTTGGAGGATTGCAACGAGATTCGGCATCTGCCAAACCTTCCATCCAGCATCAATTACTTAGGTGCCATTAACTGCTCGTCATTGGTGTCAGTATCAAAGCAAAATGGCACAGCACTGATTGATAACAGCAGTATGTTCTGGCAGCCAACGAACATTCAAAGATCACATCACTTCAACCCCCTTCCGAAGAGGTTGGAAGAATTGAATGAGCAAGTTGTAGAAACTCATGATACGGGGAAATTTGTTAGCAAATACGCATCCTTGGACCTTGAGAATTGCCTCCAACAGTTGGATGAAAATCCATGTGCAATCCTTGACTTTTCTAATGATGTTTCAACCGTCCTCAATGAGTTCCGAACCTTAGAAATTACAAAAGAGCAAGAAGAAGGTTTAGAACAATTTGTAGAGCTCTACAGTAAAGCTGTCAACATTTCTCAAGATAAGTTGCTGACCGAAGATGAGCAAGCAAAACTAACATCTGAGAAGAGAGACTTGTATAACAAACTTCAACATTCTAAACTGAAAGTTCAACAGTTTGACACCACCATCTCAACTAGAAAGTCTCAGATTGAAAAACTCCAAGAAAGACAAAGGGAAATCCAGGAAGCTACAAAGAAATTTCAAGAGAAATTTGAAGCCTTGGAAAAGGAGAGGTCAACACTAGAGTCTCGATAG 1971 0.3983 MREKEKESLTSYPHSLFFFPSSDASNFRGGMSSSTKKHDVFVSFREDTRSRVDETYDVQEWKKTESLELFCSEAFKKSYPERGYESLSDSAVKYAGGVPLALKVLEKDRDHVIRIPDACDFETTSLIEVLADKALLTISYGKIIQMHDLLQQMGLEIVCQECTVYPGRRSRLKDNEAREVIEENKDLSQIKNLRLHSDTLTKMKTLRFMKFYNSSGQSSSNTYIDLPATLEPFSDKLRYIDWIGYPYESLPSPFCAKFLVEIHMPHSKVKQLWQGIQELANLEGIDLSGCKQFEELPDLSKAPRLKWYLHPSVLYSDTLVTLILNGRTKLQGVKGERHLKSLEQISVNGCLSLEEFAVDREIQTLGASVRRKRNVMKLHVEGLRVSHTLKESSEPTNHPTSLPNLYELNLYRCNVKRFPENFDILENLRILSLEDCNEIRHLPNLPSSINYLGAINCSSLVSVSKQNGTALIDNSSMFWQPTNIQRSHHFNPLPKRLEELNEQVVETHDTGKFVSKYASLDLENCLQQLDENPCAILDFSNDVSTVLNEFRTLEITKEQEEGLEQFVELYSKAVNISQDKLLTEDEQAKLTSEKRDLYNKLQHSKLKVQQFDTTISTRKSQIEKLQERQREIQEATKKFQEKFEALEKERSTLESR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02225 656 ProSiteProfiles Leucine-rich repeat profile. 427 449 IPR001611 GO:0005515
Spst4g02225 656 SUPERFAMILY L domain-like 185 501 - -
Spst4g02225 656 Gene3D Ribonuclease Inhibitor 151 363 IPR032675 -
Spst4g02225 656 Gene3D Ribonuclease Inhibitor 364 541 IPR032675 -
Spst4g02225 656 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 64 361 IPR044974 GO:0006952
Spst4g02225 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 105 IPR027417 -
Spst4g02225 656 Coils Coil 615 656 - -
Spst4g02225 656 Pfam Leucine Rich Repeat 258 277 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02225 Spst-Chr4 62961192 62966726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02225 108 474 WRKY Transcription Factor Family AT4G12020 30.508 2.70e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02225 - - vun:114166184 532.332