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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Spst4g02187
ATGAAGAACTTGTGTGAGAAAGGCTCTGGTTCTACCCATTTAACATCTCCTTATGCTCTTGGATGCTCATCATGGGGGACTTCGTCTGAATCTGATGTTCAACAATCATCCATGTCCAGAAGTTTGACCTTGAAAATGAGTGTTCTGCCGCAACAGTGCCATAAGAACAAGCCATTGAGTTTTCAATATCAAGACCGAGACTCATCTTCATCTCAATCAACTGGTCAGTCTTATCCGGAAGTTGGTTCAGTGCAATCAGGTCAAATTTCAGTCCAGTGTAGCAATTCATCTGCTTGTTCAACTGTTAACACAACTGGGAGAAAGAATGTGGAAGGTGTCATCAGGTCATCTGTGGGGGGTCAGGATTTTGCCTTCCCTCCTTCACAATTGTGTCACAACCAACCACTTGCTCATACTGCATTCCACATTGCTGAGCCCTGCTTTAGTAGCCTACTAGCTTCCCCATATGGGCCACAACCTAATATTCATCATGCTCAACTGATAGGAATGGCTACTGCTCGAATTCCTCTACCCCTTGATCTAAGTGAGGAGCCTATATTTGTGAATGCAAAGCAGTACCATGCTATACTGAGGCGCAGACAATACCGTGCAAAACTTGAAGCACAGAACAAACTCATCAAAGAACGGAAACCATATCTTCACGAGTCTCGCCATCTGCATGCGTTGAAGAGAGCTAGAGGTTCTGGTGGTCGCTTCTTGAATACCAAAAAGCTTCAAGAGTCGAAACTCACCTCAGCAAACCATGGGCTAGATGTTTCAAGCTGTACTCAGCTGAATCTGAGGGGAAACATGTCAGAATCTAAGGTACATCTAGGGGGAAACTTAAACTACAGAGATGGTGCTTCTACAAACACCTGTTCCGACATTACTAGTGCATCTAATTGTGATGATGTCTTCCATCAACATGAATCAGACTTTAGATTATGTGGTTACCCTTCTCACATTAGAAGAAACATGCAGGGTTACTCTGCCGACATTGGTGGTGGTGGTGGTGGTAGAGGAAATCAACATCGTCTGTCAATCCTTATGTGA
1053
0.4406
MKNLCEKGSGSTHLTSPYALGCSSWGTSSESDVQQSSMSRSLTLKMSVLPQQCHKNKPLSFQYQDRDSSSSQSTGQSYPEVGSVQSGQISVQCSNSSACSTVNTTGRKNVEGVIRSSVGGQDFAFPPSQLCHNQPLAHTAFHIAEPCFSSLLASPYGPQPNIHHAQLIGMATARIPLPLDLSEEPIFVNAKQYHAILRRRQYRAKLEAQNKLIKERKPYLHESRHLHALKRARGSGGRFLNTKKLQESKLTSANHGLDVSSCTQLNLRGNMSESKVHLGGNLNYRDGASTNTCSDITSASNCDDVFHQHESDFRLCGYPSHIRRNMQGYSADIGGGGGGRGNQHRLSILM
350
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Spst4g02187
350
ProSitePatterns
NF-YA/HAP2 subunit signature.
187
207
IPR018362
GO:0003677|GO:0016602
Spst4g02187
350
PANTHER
TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
35
280
IPR001289
GO:0003700|GO:0006355
Spst4g02187
350
ProSiteProfiles
NF-YA/HAP2 family profile.
182
242
IPR001289
GO:0003700|GO:0006355
Spst4g02187
350
Gene3D
-
182
243
-
-
Spst4g02187
350
PRINTS
CCAAT-binding transcription factor subunit B signature
185
207
IPR001289
GO:0003700|GO:0006355
Spst4g02187
350
PRINTS
CCAAT-binding transcription factor subunit B signature
216
239
IPR001289
GO:0003700|GO:0006355
Spst4g02187
350
SMART
cbf3
181
242
IPR001289
GO:0003700|GO:0006355
Spst4g02187
350
MobiDBLite
consensus disorder prediction
62
81
-
-
Spst4g02187
350
Pfam
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
184
239
IPR001289
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Spst4g02187
Spst-Chr4
62623608
62626388
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Spst4g02187
9
348
CCAAT-HAP2 Transcription Factor Family
AT1G17590
42.210
7.47e-59
191
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YA
Spst4g02187
CBFB_NFYA
2.8e-26
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Spst4g02187
K08064
-
gmx:100500765
567
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Spst4g02187
4
62623608
62626388
Spst4g02187
4
62623608
62626388
ECH
Spst5g00306
5
2622334
2624069
Spst4g02187
4
62623608
62626388
PCT
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