Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02184 ATGTTGACTTGCATAGCGTGTACCAAGCAACTCAATAATGGATCTCTTTGCCAAGAAGAAGAGGAAGAAGCTGTTCACACGCCTAGCACCAAGCAAGCCATCAAGGCTCTCACTGCACAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCCTATAAGAGCTGCAGACCTTGTTCAGGATCTTCCAACGGTAACAGGAATAGGAAGTATGCAGACTCAGATATGGGGTCAGATTCAGCAAGGTTCAACTGGGCTTACCGCAGAACTGGGAGTTCCAATTCAACCCCAAGGATGTGGGGGAAGGAAACGGAAGGTGGTAGGGTGAAAGGGCTCTCCAGCGGCGAAGGAACACCAGCATCAGTGAGTGGACGCACTGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAGGAGTGGATTGCCCAAGTGGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGAGGGAATGATCTCAAAAGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAAGCAGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGTCACTCCTCCGCTCAGCAAAGAGCGTGCACCCCGCCATTTTCACCACCCAATGGGAATAGGCTACTCCTCATCTGATTCACTGGATCACCACCAAATGCAACCTCAACCTTGCTATGAAACAAGTGGTCTGGCATCAACACCTAATCTTTCCAACATTAGTGCACCTAAGACTGAAAAATCATCCCTTGATGGTTCTGTAAGGACCAGCTCATCTGGAGAAGATCACTCAGGCGATTTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTCTACATCACTATCAGAGCACTGCCAGGTGGAACCAGAGAACTCAGGCGTGTTCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGA 1107 0.4815 MLTCIACTKQLNNGSLCQEEEEEAVHTPSTKQAIKALTAQIKDMAVKASGAYKSCRPCSGSSNGNRNRKYADSDMGSDSARFNWAYRRTGSSNSTPRMWGKETEGGRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERAPRHFHHPMGIGYSSSDSLDHHQMQPQPCYETSGLASTPNLSNISAPKTEKSSLDGSVRTSSSGEDHSGDFSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02184 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Spst4g02184 368 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Spst4g02184 368 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Spst4g02184 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Spst4g02184 368 MobiDBLite consensus disorder prediction 57 76 - -
Spst4g02184 368 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Spst4g02184 368 MobiDBLite consensus disorder prediction 89 123 - -
Spst4g02184 368 MobiDBLite consensus disorder prediction 248 309 - -
Spst4g02184 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
Spst4g02184 368 MobiDBLite consensus disorder prediction 200 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02184 Spst-Chr4 62585583 62588754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02184 1 368 Major Intrinsic Protein MIP AT1G31880 49.347 8.10e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02184 - - gmx:100805480 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02184 4 62585583 62588754 Spst4g02184 4 62585583 62588754 ECH