Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02175 ATGGGTTTGAATCTCTTGGGGGACGAGGAATCTTTTATAAGAAACTTCTTGGATACATGGTTAAGTGGTGGTGTAAAGCCAAATGGATTAAATGAGATGGCAAGAACAGAAAATGATTCATGGTATCCAGTAAAATCTTCGACTTGTCCTACATGTCCCAATGACTATACTCAAAAAAAGTACGATGTGTTCATTAGCTTCAGTGGTGAAGATGTTCGTCGAGGTTTCCTTAGCCATTTGGTTGAGGCATTTTCTCAAAAGAAAATTGTTGTCTTTGTGGATGATAGCATTCATAAAGGAGATGAACTATCTGAAGCACTTCTTGCAGCAATTGAAGCATCATTTATTTCTTTGGTTGTATTTTCAGAAAACTATGCTTCTTCAAATTGGTGTTTGTTGGAGCTTGAGAAAATTGTTGAGTGCAGGAAAAAATATGGACAAATTGTAATGCCTGTTTTCTACAATTTAAATCCTTCAGACGTACGACATCAAAATGGGAGTTATGGAGATGCCTTTGCAAAACATGGAAGAAAATATAACTTCACTACTATACAAACCTGGCGATCTGCTTTGAGTAAATCTGCTAATCTATCAGGATTCCATTCATCAAAATTTCGAGATGATGCTGAACTTGTTAAAAAGATGGTTAAATGTGTGCTGATGAGGTTGAATCATGTGCACCAACTGGAAGTAAAGTACATAAATTTTGTATTGAAAGATCATGATTATTCAGTGGATGCAGGATTGGAAAGGTTGAAGGATAAAGGTCTTATCAGTATATCTCAAGAAAATGTTGTATCAATGCATGACATTATACAAGAAACTGCTTGGCAGATTGCTCGCATTGAAGACCCTAGAAGCCAGAGTCGACTATTCGATCCTGATGACATTTATGAAGTACTAGCATACGACAAGGGTAACGAGGCTATCAGAAGCATAATCATCAACTTGTTCAGACTCGATCAACTGCATTTAAACCCACAAGTATTTGCCAAGATGAGCAATCTCCATTTTCTGAATTTTTATACTGCATGGTCTCTCAATGTTGTCCTCAAAGAACAGTGGGGCTTGTATCTTCCTCAAGGGCTTGAATATTTGCCGAATGAACTAAGATATTTTGGTTGGACACACTATCCTTTGGAATCTTTGCCTTCAAAGTTTTCAGCGGAAAATCTTGTTGAGTTGCACTTGCCATATAGCAGGGTGAAACAACTATGGCATAAAGTACCGGATCTTGTGAACTTGAAGGTCCTTATACTCCATTCATCTGCACACATAAGGGAGCTGCCAGACTTTTCAAAGGCCTCAAATCTTGAAGTAATAGATCTCAGATCTTGTGTAGGGTTAACTAGTGTTCATCCATCAGTTTTCTCTCTGAAAAAGCTTGAGAAATTGGAGTTGGATGGATGTAGTTCCCTTACAAGCCTTCGAAGCAATACCCGTTTGGACTCTCTTAGATATCTCTCTCTCCGTCTTTGCATGAACCTAGCAGATTTCTCAGTGATCTCAAAGAATATGACAAGGTTGAATTTACAACTCACTAGTATCAAACAACTCCCTTCATCTATTGGATCTCAAAGCAAGCTTGAAAAGTTAAGTCTATCATACACTTACCTTGAGAACTTGCCTGCAAGCGTTAAAAATCTTAGAGGGTTGAGACATCTTGATGTACGATATTGTAGGAAGCTTAAGTCTCTACCAGAGCTTCCTCCATCACTTGAAATACTAGATGCCCGTCAATGCGTATCATTGGAGACTGTAACGTTCCCTTCTATTGCTCAACAATGGAAGGAAAATAAGAAAAAGGTTGCCTTCTGGAACTGCTTGAAACTCGATGAACATTCTCTCACGGCTATTGAGACGAATGCGCAAATTAACATGGTGAAATTTGCGCTCCAACATTTGTCTGCATCTGGGGATGCTGAAGGTACTTATGTGTACCCGGGAAGCCAAGTTCCAGAATGGTTGATGTATAAGACGGCACATGATGATTACGTAACCATTGTTCCGAAGTCTCACTCGGGCTTCATATTTTGCTTCATTGTACCGGAATTGCCTTTTGGGGATTCCGTTTTGAAATTGAAGATTAGTACTGGGGGTGAGGGTGAAGGTGACAGTATGAATGTGTACTTGGTTCGACCACAACATGGTATTAGGTCGGATCATGTGTATCTATTGTACAATCAAGCATGTTCTCGATTCCTAATTAATCGTGCCAAAAATCAACAAACATTGAAAATCAAGGTTACAGTAGAATCACTACAACTCACATCCGAGTTCAAACTGGTGCAGTTAAGAGGGTTTGGGGTCAGCACAATCAATAATTTTCTTCAAACTGATGCTAGCATTCCAAAGGAACATCATGAATTCTACCCCGGCACTGTGTGGAATAGGTGA 2397 0.3913 MGLNLLGDEESFIRNFLDTWLSGGVKPNGLNEMARTENDSWYPVKSSTCPTCPNDYTQKKYDVFISFSGEDVRRGFLSHLVEAFSQKKIVVFVDDSIHKGDELSEALLAAIEASFISLVVFSENYASSNWCLLELEKIVECRKKYGQIVMPVFYNLNPSDVRHQNGSYGDAFAKHGRKYNFTTIQTWRSALSKSANLSGFHSSKFRDDAELVKKMVKCVLMRLNHVHQLEVKYINFVLKDHDYSVDAGLERLKDKGLISISQENVVSMHDIIQETAWQIARIEDPRSQSRLFDPDDIYEVLAYDKGNEAIRSIIINLFRLDQLHLNPQVFAKMSNLHFLNFYTAWSLNVVLKEQWGLYLPQGLEYLPNELRYFGWTHYPLESLPSKFSAENLVELHLPYSRVKQLWHKVPDLVNLKVLILHSSAHIRELPDFSKASNLEVIDLRSCVGLTSVHPSVFSLKKLEKLELDGCSSLTSLRSNTRLDSLRYLSLRLCMNLADFSVISKNMTRLNLQLTSIKQLPSSIGSQSKLEKLSLSYTYLENLPASVKNLRGLRHLDVRYCRKLKSLPELPPSLEILDARQCVSLETVTFPSIAQQWKENKKKVAFWNCLKLDEHSLTAIETNAQINMVKFALQHLSASGDAEGTYVYPGSQVPEWLMYKTAHDDYVTIVPKSHSGFIFCFIVPELPFGDSVLKLKISTGGEGEGDSMNVYLVRPQHGIRSDHVYLLYNQACSRFLINRAKNQQTLKIKVTVESLQLTSEFKLVQLRGFGVSTINNFLQTDASIPKEHHEFYPGTVWNR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02175 798 Gene3D Ribonuclease Inhibitor 502 640 IPR032675 -
Spst4g02175 798 Gene3D - 57 229 IPR035897 -
Spst4g02175 798 FunFam Disease resistance protein (TIR-NBS-LRR class) 57 225 - -
Spst4g02175 798 SMART till_3 60 197 IPR000157 GO:0007165
Spst4g02175 798 Pfam TIR domain 60 226 IPR000157 GO:0007165
Spst4g02175 798 ProSiteProfiles TIR domain profile. 59 223 IPR000157 GO:0007165
Spst4g02175 798 Gene3D Ribonuclease Inhibitor 301 501 IPR032675 -
Spst4g02175 798 SUPERFAMILY L domain-like 315 608 - -
Spst4g02175 798 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 200 IPR035897 -
Spst4g02175 798 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 246 583 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02175 Spst-Chr4 62512253 62522237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02175 227 568 WRKY Transcription Factor Family AT4G12020 38.701 1.24e-55 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02175 - - gmx:100778934 800.431