Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02164 ATGAGTGCAAGTGCAAGTGCAAGTGCAAGAAATAGGTCTCCTTTCACACCAACTCAGTGGCAAGAACTTGAGCAACAAGCTCTTGTTTTCAAATACATGGTCACAGGAACACCTATCCCACCAGATCTCATCTACTCTATTAAAAGAAGTCTAGACTCTTCAATTTCTTCAAGACTCTTTCCACACCATCCAATTGGGTGGGGATGTTTTGAAATGGGATTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGTTCAAAGGAAGCATATCCAGACTCCAAGTACTGTGAAAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAGCAACAAGCACCGCCACAAACACCTCCCAAACAATCCCATCTTATAGCAGAAACCTTTCCTTGACCAACCCCACCATAACCTCACCCTCCTTCCCTTTCTCTCCTTTGCCATCTTCTATGCCCTGTGAGTCCCAACCCTTTTCCCAATCCTACCAAAACCCTTCTCTCAATCCTTTCTTCTACGCCCAATCAACCTCCTCTAGACCCCCAGATTCTGATTTTCCACCTCAAGATGCCACTACCCACCAGCTATTCATGGACTCTGGGTCTTATTCTCACGATGAAAAGGATTATAGGCATGTTCATGGAATAAGGGAAGATGTGGATGAGAGAGCTTTCTTCCCAGAAGCTTCGGGATCAGCTAGGAGCTATACTGACTCGTATCAACAACTATCAATGAGCTCCTACAAGTCCTATTCAAACTCCAACTTTCAAAACATCAATGATGCCACCAACCCAAGACAGCAAGAGCAACAACACTGCTTTGTTTTGGGTACTGACTTTAAATCAACAAGACCAAGCAAAGAGAAAGAAGCTGAGACAACAAGCCAGAGACCCCTTCACCGTTTCTTTGGGGAGTGGCCACCAAAGAACACAGATTCCTGGCTAGATCTTGCTTCCAACTCCAGAATCCCAGCCGAGAAGAAAGCATGGGGTGGAATTAAGAGAGCAAATGATGAATGCGTGGCATGTTATGTTGGTGCTAAAGTCCCCTCAAAAGAGCATTCTAATATAGCATTCTTACAAAAGTTGAACAAATCCGAGGGTGAACCGGGATTTGCAAATTTATTGAGGATCAACGTTCTGTGA 1185 0.4473 MSASASASARNRSPFTPTQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDSSISSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSATSTATNTSQTIPSYSRNLSLTNPTITSPSFPFSPLPSSMPCESQPFSQSYQNPSLNPFFYAQSTSSRPPDSDFPPQDATTHQLFMDSGSYSHDEKDYRHVHGIREDVDERAFFPEASGSARSYTDSYQQLSMSSYKSYSNSNFQNINDATNPRQQEQQHCFVLGTDFKSTRPSKEKEAETTSQRPLHRFFGEWPPKNTDSWLDLASNSRIPAEKKAWGGIKRANDECVACYVGAKVPSKEHSNIAFLQKLNKSEGEPGFANLLRINVL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02164 394 MobiDBLite consensus disorder prediction 111 207 - -
Spst4g02164 394 Pfam WRC 80 122 IPR014977 -
Spst4g02164 394 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Spst4g02164 394 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Spst4g02164 394 Pfam QLQ 14 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Spst4g02164 394 PANTHER GROWTH-REGULATING FACTOR 5 13 328 IPR031137 GO:0005634|GO:0006351|GO:0032502
Spst4g02164 394 ProSiteProfiles WRC domain profile. 79 123 IPR014977 -
Spst4g02164 394 MobiDBLite consensus disorder prediction 162 207 - -
Spst4g02164 394 MobiDBLite consensus disorder prediction 120 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02164 Spst-Chr4 62369808 62376463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02164 1 122 GRF Transcription Factor Family AT3G13960 71.545 7.79e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Spst4g02164 WRC 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02164 - - gmx:100806024 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02164 4 62369808 62376463 Spst4g02164 4 62369808 62376463 ECH