Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02146 ATGGCACTACAATTCACATCTCTCAATACAGCCATATGCGCTGCAGCTTTTCTTGTGCTCCTCCTCTTCCTCCGCCGTCTCCGCCGCCGCCGATATAACCTGCCCCCAGGCCCAAAGCCCTGGCCCGTTATAGGCAATCTCAATCTAATTGGCACCCTCCCACACCGGTCAATCCACGCGCTTTCTGAAAAATACGGGCCCATCATGCATGTATGGTTCGGCTCAAATCCGGTGGTGGTGGGCTCATCTGTGGACATGGCAAAGGCCTTTCTCAAAACCCACGACGCAACCCTCGCTGGCCGGCCCAAGTTCTCAGCCGGCAAATACACAGCCTACAACTACTCCGACATAACCTGGTCCCAGTACGGCCCGTACTGGCGCCAGGCCCGTAGAATGTGCTTAATGGAATTGTTCAACGCAAGACGTCTCGAAGAATACGAATACATTAGAAAACAGGAGTTACATGCTCTTCTCAATGAACTCTTCAATTCCCAAAACAAAACAATTTTATTAAAAGACCACCTTACGAATTTGAGCCTCAACGTTATAAGTCGCATGGTGTTGGGGAAGAAGTACCTGGAAGAGTGCGAAAACGCCATCGTTTCGCCTGAGGAGTTTAAAAAGATGCTTGACGAGTTGTTCTTGCTTAATGGAGTGTTGAACATCGGAGACTTCATACCTTGGATTCATTTCTTGGATTTGCAGGGTTACGTAAAGAGGATGAAGGTTTTGAGCAAGAAGTTTGATGGGTTTATGGAGCACGTGTTGGACGAACATATTGAGAGGAAGAAAGGTGTCGAGGATTATGTCGCAAAGGACATGGTTGACGTTCTGCTGCAACTTGCTGAAGATCCTACACTTGAAGTCAAGCTTGAGAGACACGGAGTCAAGGCTTTTACACAGGATCTAATAGCAGGTGGGACTGAGAGTTCTGCTGTGACAGTAGAATGGGCAATCTCTGAGCTGTTGAGAAGACCAGAGATTTTCAAGAAGGCAACAGAGGAGCTAGACAGGGTAATAGGAAGAGAAAGATGGGTTGAAGAGAAGGACATTGTGAATTTACCTTATGTTAATGCCATTGCCAAGGAAGCAATGAGGTTGCACCCTGTGGCACCAATGTTGGTGCCAAGAATGGCCAGAGAGGATTGCCATATTGGAGGGTATGACATTCCCAAAGGGACTCAAGTGCTTGTGAATGTATGGACTATTGGAAGAGACCCCGCAATTTGGGACAACCCAAATGAATTCCAACCTGAGAGGTTTCTAGGTAAGGAGATTGATGTGAAAGGGCATGACTATGAGTTGTTGCCATTTGGTGCTGGGAGAAGGATGTGCCCTGGGTACCCTCTTGGCCTTAAGGTGATTCAAACAAGTTTGGCCAACCTCTTGCATGGATTTAACTGGAGACTCCCTGAGAATGTGAAGAAAGAGGACTTGAACATGGATGAGATTTTTGGGTTGTCTACGCCTAAGAAAATCCCTCTGGAAACAGTTGTTCAGCCTAGGCTTCCACATCATCTTTATTCTCTCTGA 1533 0.4716 MALQFTSLNTAICAAAFLVLLLFLRRLRRRRYNLPPGPKPWPVIGNLNLIGTLPHRSIHALSEKYGPIMHVWFGSNPVVVGSSVDMAKAFLKTHDATLAGRPKFSAGKYTAYNYSDITWSQYGPYWRQARRMCLMELFNARRLEEYEYIRKQELHALLNELFNSQNKTILLKDHLTNLSLNVISRMVLGKKYLEECENAIVSPEEFKKMLDELFLLNGVLNIGDFIPWIHFLDLQGYVKRMKVLSKKFDGFMEHVLDEHIERKKGVEDYVAKDMVDVLLQLAEDPTLEVKLERHGVKAFTQDLIAGGTESSAVTVEWAISELLRRPEIFKKATEELDRVIGRERWVEEKDIVNLPYVNAIAKEAMRLHPVAPMLVPRMAREDCHIGGYDIPKGTQVLVNVWTIGRDPAIWDNPNEFQPERFLGKEIDVKGHDYELLPFGAGRRMCPGYPLGLKVIQTSLANLLHGFNWRLPENVKKEDLNMDEIFGLSTPKKIPLETVVQPRLPHHLYSL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02146 510 Gene3D Cytochrome P450 27 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Spst4g02146 510 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 FunFam Cytochrome P450 84A1 26 503 - -
Spst4g02146 510 SUPERFAMILY Cytochrome P450 35 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 CDD CYP71_clan 66 495 - -
Spst4g02146 510 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02146 510 PANTHER CYTOCHROME P450 98A9 4 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02146 Spst-Chr4 62239612 62241607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02146 8 510 Cytochrome P450 AT5G07990 43.053 2.86e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02146 K20623 - gmx:100790480 930.243