Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02141 ATGTCTGCACCGATGATAATTGACCCTATGGTGATATCGGCACCAGAAACTCAATCAGCAGCTAGCATACTAGTTGCACAAAGTGAGGTTGAATTTGCTGTGTGTGACTGTTGTGGACTAACAGAAGAGTGCACCCCAGCCTATATAGAGAGAATCAGGGAGAGGTACCATGGAAAATGGGTTTGTGGGTTGTGTGCTGAGGCTGTTAAAGATGAAATTGTGAGGTCTGAGAGGCTTGTTAGCACAGAAGAAGCAATGGCAAAGCACATGAACTTCTGCAAAAAGTTCAAGGCATCAGGACCTCCTCCGAATCCAACAGTGCATTTGATATCAGCTATGAGACAAATTCTTAAAAGGAGTTTGGATTCTCCTAGAGTAAGATCCACACCAAATAGTCCAACTAAGACTATCACAGAAATTCATGCTTCTGTGCTTACAAGGTCTGAGAGCTGCTTCCCTACCCTCACTGAAGGGTTGGGATGA 483 0.4431 MSAPMIIDPMVISAPETQSAASILVAQSEVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGLCAEAVKDEIVRSERLVSTEEAMAKHMNFCKKFKASGPPPNPTVHLISAMRQILKRSLDSPRVRSTPNSPTKTITEIHASVLTRSESCFPTLTEGLG 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02141 160 PANTHER OS01G0745000 PROTEIN 22 157 IPR012876 -
Spst4g02141 160 Pfam Protein of unknown function (DUF1677) 30 119 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02141 Spst-Chr4 62181739 62182221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02141 - - gmx:100803697 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00663 9 5778764 5779195 Spst4g02141 4 62181739 62182221 ECH
Spst4g02141 4 62181739 62182221 Spst4g02141 4 62181739 62182221 ECH
Spst4g02141 4 62181739 62182221 Spst9g00665 9 5783034 5783438 ECH
Spst4g02141 4 62181739 62182221 Spst8g01477 8 14684810 14685241 ECH