Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02131 ATGGCCATAGCTCCAGCAATAATCCTTCAGTCAACTCTCGTGATCATTGTCACTTTACCTATGATATATTCCATGACAGAAGCTGAAGCTTTGGTGAATCTCAAAAGTACTTTCTCCAACGCTAAATTATTGGATGGTTGGGTGCCCGATTCTGTACCATGTAGAGATCATGGTCAATGGGAAGGTATTGCTTGCAACAACGGTCTTGTCACGGGGCTTCGCCTTGGAGGAATAGGGTTAGTGGGGGAAATACACGTTGATCCATTGCTTGAACTCAAGGGTCTTCGAACTGTTAGCCTTAATAACAATTCTTTCTCAGGTTCTATGCCAGAGTTCAACCGGATAGGGTTCTTGAAAGCCTTGTATTTGCAAGGAAACAAGTTTTCTGGGGATATTCCTGGGGATTATTTCCTGAGAATGAGGTCTTTGAAGAAAGTGTGGCTTTCTGATAACCAATTCACGGGGAGTATTCCATATTCATTGGTCGAAATTCCTCATCTTATGGAGTTGCACCTTGAAAACAATCAATTTAGTGGAACCATTCCTAATCTGAATACCCCATCATTGGATAGATTGAATGTTTCCAACAACAAATTGGAAGGTGAAGTTCCAGCTGGTTTGTTGAGATTCAGTGAGAGTTCGTTTTCAGGGAATGCTGGTCTTTGTGGTGATAATTTTGGCAAACCATGTGAATTGGAGAGCCCAAGTCCTACTCGTATTGATGCATCAGGTGCACAAGATAATGTTGGTGGTCGTGCACATTTGCCACATAGGAGTTCCCCATTGGAGATTACTGGCATTATAATTGGGAGTGTAGTGCTTATCTCAATAGTTGTCTTTTTTATTGTGAGATCGAGGCAAAAGAAGGAGGAGAACGTTGATGTACTTGGAAATGATACTGATGATGGTGCAGTGGAAGTTCAAGTGACTGCACCAGTGAAAAGGGATACGGATGCAAGTACAAGTACAACCACAACAGTCAGAAAAGCATCGTCCAAAAGGGCATCTATATCTTCGCAAGGTAAAAGCGTTGGAGAACTTGTGATGGTGAATGATGAGAAGGGTTTATTTGGGTTGCCAGATTTGATGAAGGCAGCAGCAGAAGTGCTAGGAAATGGAGGCTTTGGATCTTCTTACAAAGCCGTCATGGCTAATGGAGTGGCAGTGGTGGTGAAAAGGACCAGAGAGATGAATGTGTTGGAAAAAGATGCTTTTGATGCAGAGATAAGGAAGCTTACAACGCTTAAACACGGGAATATATTGACCCCTTTGGCTTATCATTTCAGAAAGGATGAAAAACTAGTGATCTTTGAGTATGTTCCCAGAGGCAGTCTACTGTTTTCATTGCATGGTGATAGAGGACCATCGCATGCTGAGCTGGATTGGCCAGCACGTATAAAAATTGTACGTGGAATTGCCGAAGGGTTGCGTTATCTTCACACCGAACTTGCTTCCTTTGATCTTCCACATGGAAATCTCAAGTCCAGCAATGTTCTCCTTGGACCTGAGAACGAACCACTGCTTGTAGATTACGGGTTCACCCGCATGGTTAACCCTTCAAGTGCTGCACAGGTATTGTTTGCTTACAAGGCACCCGAGGCAGTACAACGTGGTCAAATTTCACACAGTTGTGATGTTTATTGTCTTGGGGTCGTCATACTTGAGATACTCACTGGGAAATTCCCTTCTCAATATCTCAGCACTGGCAAGGGTGGAACTGATGTGGTGCAATGGGTTGAAACCGCAATATTTGAAGGGAGGGAATCAGAAGTGCTTGATCCTGAAATTGTAGGATCTAGGAATTCACTGGGTGAGATGGAACAACTCCTACGCATTGGTGCTGCTTGCGCTGAAAGTAACCCTTTACAACGGTTAGAGATAGATGAAGCCATTAGAAGGATAGAGCAGATAAGAACCGAGGGTGGCCAAGAATCAAGAACAATAGAGGTGCCATCTGATAGAGATGACTATGAGGATTCACAAATATTTGAGAACCAAGGAACTTTTGACCAATCACGAAGGAGACATGGAACAAACAGCTTCGGAAGTGAGGATAATATTGAACTTGGCGGCTCCTAG 2079 0.4339 MAIAPAIILQSTLVIIVTLPMIYSMTEAEALVNLKSTFSNAKLLDGWVPDSVPCRDHGQWEGIACNNGLVTGLRLGGIGLVGEIHVDPLLELKGLRTVSLNNNSFSGSMPEFNRIGFLKALYLQGNKFSGDIPGDYFLRMRSLKKVWLSDNQFTGSIPYSLVEIPHLMELHLENNQFSGTIPNLNTPSLDRLNVSNNKLEGEVPAGLLRFSESSFSGNAGLCGDNFGKPCELESPSPTRIDASGAQDNVGGRAHLPHRSSPLEITGIIIGSVVLISIVVFFIVRSRQKKEENVDVLGNDTDDGAVEVQVTAPVKRDTDASTSTTTTVRKASSKRASISSQGKSVGELVMVNDEKGLFGLPDLMKAAAEVLGNGGFGSSYKAVMANGVAVVVKRTREMNVLEKDAFDAEIRKLTTLKHGNILTPLAYHFRKDEKLVIFEYVPRGSLLFSLHGDRGPSHAELDWPARIKIVRGIAEGLRYLHTELASFDLPHGNLKSSNVLLGPENEPLLVDYGFTRMVNPSSAAQVLFAYKAPEAVQRGQISHSCDVYCLGVVILEILTGKFPSQYLSTGKGGTDVVQWVETAIFEGRESEVLDPEIVGSRNSLGEMEQLLRIGAACAESNPLQRLEIDEAIRRIEQIRTEGGQESRTIEVPSDRDDYEDSQIFENQGTFDQSRRRHGTNSFGSEDNIELGGS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02131 692 SUPERFAMILY Protein kinase-like (PK-like) 368 634 IPR011009 -
Spst4g02131 692 ProSiteProfiles Protein kinase domain profile. 364 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02131 692 Gene3D Ribonuclease Inhibitor 21 115 IPR032675 -
Spst4g02131 692 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Spst4g02131 692 SUPERFAMILY L domain-like 52 209 - -
Spst4g02131 692 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 640 IPR046959 -
Spst4g02131 692 MobiDBLite consensus disorder prediction 662 686 - -
Spst4g02131 692 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 86 181 - -
Spst4g02131 692 Gene3D Transferase(Phosphotransferase) domain 1 440 658 - -
Spst4g02131 692 Pfam Protein kinase domain 368 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02131 692 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Spst4g02131 692 Gene3D Ribonuclease Inhibitor 117 232 IPR032675 -
Spst4g02131 692 MobiDBLite consensus disorder prediction 641 661 - -
Spst4g02131 692 Gene3D Phosphorylase Kinase; domain 1 331 439 - -
Spst4g02131 692 MobiDBLite consensus disorder prediction 641 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02131 Spst-Chr4 62091577 62094060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02131 6 637 Receptor kinase-like Gene Family AT3G42880 45.216 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst4g02131 Pkinase 3.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02131 - - var:108346415 1020.38