Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02127 ATGGCAATGGTGCAGTTATTCAACGGCGGCTTTCACGTCATCACCAAAGTCGCCCTTAACGTTGGCGTCAACCAAATCAGGGGAAGGCTTGATGCGAAGTTAAAGTTGCTTCTTGGCGCCCAGTTGAACATGGGTTTGAATTCGGAACCAGCCTCTTTGCTTGCATATATGCTAGACACACCTAGCTACTCATCAGTGGCACCGTTGATTATTTGCTCTTGTTTCCTCGCATCTCAGTCTCAATTCTGCGCCAACAACCTCAAATCTTTAGTTCCAGGAAAATTGGCATGTCTTTCTCTAAAACCGGACAAGGTTGTTCCAGACACAGAATATACACTTTATGGGTCTTCTAAGGGTCCAAATTTGCTGCACTGCTCAAAGTGTAAGGAAAACATGCACCAAAGGTTCCCCTCGCTAATATTTGTAGCTAGCAATATTTTGATGTTCTCTATGCCTAATACAGCTTTGGCTGAAACGTGTGAGGCTGATAATTCTCTTTTCAACATGCCTAACTTTCTAAGGAATCAACAACTGGATAAAGCATTTACAGAGTTTAAGAATGCACTCGAGCTTGCCCAGAATCTGAAGGACCCTATTGAAGAGAAAAAAGCTGCTAGAGGTCTAGGAGCCTCACTGCAAAGACAAGGAAAGTACAGAGATGCTATTAAATACCATTCCATGGTTTTGGTCATCTCTGAACGAGAAGGGGAGGACTCAGGGAATACGGAAGCGTTTGGGGCAATTGCTAATTGTTACACTGAGCTTGGAGAGCTTGAGACAGCAGGCCAATTCTATGACAAGTATATTGCAAAGCTGGAAAAGGACTGA 828 0.4372 MAMVQLFNGGFHVITKVALNVGVNQIRGRLDAKLKLLLGAQLNMGLNSEPASLLAYMLDTPSYSSVAPLIICSCFLASQSQFCANNLKSLVPGKLACLSLKPDKVVPDTEYTLYGSSKGPNLLHCSKCKENMHQRFPSLIFVASNILMFSMPNTALAETCEADNSLFNMPNFLRNQQLDKAFTEFKNALELAQNLKDPIEEKKAARGLGASLQRQGKYRDAIKYHSMVLVISEREGEDSGNTEAFGAIANCYTELGELETAGQFYDKYIAKLEKD 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02127 275 Gene3D Tetratricopeptide repeat domain 167 275 IPR011990 GO:0005515
Spst4g02127 275 PANTHER PROTEIN FLUORESCENT IN BLUE LIGHT, CHLOROPLASTIC 124 170 IPR044243 GO:0015995|GO:0033014
Spst4g02127 275 Pfam Tetratricopeptide repeat 205 270 - -
Spst4g02127 275 SUPERFAMILY TPR-like 160 272 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02127 Spst-Chr4 62039892 62045788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02127 1 26 Nodulin-like Gene Family AT3G45870 84.615 3.35e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02127 - - vra:106775694 202.601