Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02114 ATGGCTAACGAAGGAAACAAAAGCAATGACTTCTATACGATCTTGGGGTTGAACAAGGAGTGCACTGAATTGGAGCTAAAGAATGCATATAGGAAACTTGCAAAGAAATGGCACCCCGATCGTTGTTCAGCATCTGGGAATTCAGAGTTGGTCGAACAAGCTAAGAAGAAATTCCAGGAAATCGGGGAAGCCTACGCTGTTTTATCTGACGCCAACAAAAGGTTAATGTACGACGTTGGAGTCTACGACAGTGATGACGACGAAAACGGCATGGGGGACTTTTTGGACGAAATGTTAACAATGATGAGTCAGACCAAATCAAATGAAAATGGAGAGGAGAGCTTTGAGGAGTTGCAACAGCTGTTTGAAAACATGTTTCAAGCTGATATTGGATTGGATGGAAGCCCCTCTCTTTCTTCTGCCGATTGCTCTACTTCATCTGCTTACATGACTTACAGTGAAAGTTCTAGTTCAAATAAACGCAATGCCACTGAGATGAAATTTGGGAAGGCAGAGGGTACCAGTTACCAGAATTTCTGTTTTGGGACAGGTGAACCTACTCCAAGATATAAAGGAGGAAAACGAGGGAATTCCAGAAGGAGGAGGTAG 609 0.4319 MANEGNKSNDFYTILGLNKECTELELKNAYRKLAKKWHPDRCSASGNSELVEQAKKKFQEIGEAYAVLSDANKRLMYDVGVYDSDDDENGMGDFLDEMLTMMSQTKSNENGEESFEELQQLFENMFQADIGLDGSPSLSSADCSTSSAYMTYSESSSSNKRNATEMKFGKAEGTSYQNFCFGTGEPTPRYKGGKRGNSRRRR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02114 202 Pfam DnaJ domain 10 78 IPR001623 -
Spst4g02114 202 CDD DnaJ 10 70 IPR001623 -
Spst4g02114 202 MobiDBLite consensus disorder prediction 175 202 - -
Spst4g02114 202 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Spst4g02114 202 Gene3D DnaJ domain 7 134 IPR036869 -
Spst4g02114 202 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
Spst4g02114 202 PANTHER PUTATIVE, EXPRESSED-RELATED 2 177 - -
Spst4g02114 202 SMART dnaj_3 9 73 IPR001623 -
Spst4g02114 202 PRINTS DnaJ domain signature 30 45 IPR001623 -
Spst4g02114 202 PRINTS DnaJ domain signature 12 30 IPR001623 -
Spst4g02114 202 PRINTS DnaJ domain signature 73 92 IPR001623 -
Spst4g02114 202 PRINTS DnaJ domain signature 53 73 IPR001623 -
Spst4g02114 202 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02114 Spst-Chr4 61936111 61938889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02114 12 78 C2H2 Transcription Factor Family AT1G74250 44.118 2.04e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02114 - - gmx:100791192 313.923