Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02112 ATGGGAGGGTTAGTACTACTGGTATGCATGGTTGTGTCATGGATGTTCATACATAGATGGAGTCAAAGAAACAAGAAAGGTCCCAAAACTTGGCCCTTTTTTGGAGCTGCCATCGAACAATTGATGAACTATGACAGGATGCATGATTGGCTCGTCAATTATTTGTCCGAGTCAAAAACTGTCGTGGTTCCTATGCCTTTCACAACTTACACTTACATTGCTGATCCTGCAAATGTAGAACATGTACTTAAGACCAACTTCAATAATTATCCAAAGGGTGAAGTGTACCATTCATACATGGAAGTGCTGCTTGGAGATGGGATATTTAATGTTGATGGTGAGCCTTGGAAGAAACAAAGGAAAACTGCAAGCTTAGAGTTTGCATCCAGAAATTTAAGGGAATTTAGCACCAAAGTTTTCAAGGAGTATGCCTTGAAACTTTCAGCCATTCTCAGTCAAGTATCTATACTTAACCAAGAAATAGACATGCAGGAACTGTTAATGAGAATGACTTTGGACTCCATATGTAAAGTTGGATTTGGAGTGGAAATTGGAACACTGTCTTCCAATTTACCAAAGAATAGTTTTGCTCATGCATTTGACACTGCAAATATCATAGTAACACTTCGCTTCATTGATCCACTTTGGAAGATTAAGAAAATGCTAAGTATAGGCTCCGAAGCACAACTTGAGAAGAGTATCAAAGTCGTTGATGACTTCACCTACTCAGTAATTCGGAAAAGGAAGGCAGAGATAGAAAATGTCAAAAAAAGTGGGCAACAAAATCAGATGAAGCATGATATATTATCAAGATTCATAGAACTAGGAGAAAGCAATGCAACAGACAAGAGTTTGAGAGATATTGTGTTGAACTTTGTGATTGCTGGTCGAGACACAACTGCAACGACCCTATCATGGGCCATATACATGGTAATGACACATGCTCATGTTGCTGACAAACTTTACCTGGAGCTGAAAAATTTTGAGGAGAATAGTGCAAAAGAAGAGAACATTTCCTTGCCTCAATGTGACAAAGAAGACTCTGAATCATTCAATCAAAGAGTAGAGCAATTTTCAAGGTTATTGAATAAAGATTCACTAGAGAGATTGCACTATCTGCATGCTGTCATAACGGAGACCCTAAGATTGTATCCAGCAGTTCCTCAGGATCCGAAGGGCATATTAGAGGATGATGTATTGCCAGATGGAACCAAAGTAAAGGCAGGGGGTATGGTCACTTATGTGCCATACTCTATGGGAAGGATGGAGTATAATTGGGGTCCTGATGCACCTTCATTTGTCCCTGAGAGATGGTTCAAAGATGGTGTTCTCAAAAATGAATCTCCATTCAAATTCACTGCTTTTCAGGCAGGTCCTAGGATATGCCTTGGCAAGGACTCTGCATATCTACAGATGAGGATGGTGCTAGCTATTTTGTGCAGATTCTACAAGTTCAACTTGGTGTCAGGTCACATTGTGAAATATAGGATGATGACAATATTATCAATGGCACATGGCTTGAAGGTTACCATAGAACAACGTTCATGA 1548 0.396 MGGLVLLVCMVVSWMFIHRWSQRNKKGPKTWPFFGAAIEQLMNYDRMHDWLVNYLSESKTVVVPMPFTTYTYIADPANVEHVLKTNFNNYPKGEVYHSYMEVLLGDGIFNVDGEPWKKQRKTASLEFASRNLREFSTKVFKEYALKLSAILSQVSILNQEIDMQELLMRMTLDSICKVGFGVEIGTLSSNLPKNSFAHAFDTANIIVTLRFIDPLWKIKKMLSIGSEAQLEKSIKVVDDFTYSVIRKRKAEIENVKKSGQQNQMKHDILSRFIELGESNATDKSLRDIVLNFVIAGRDTTATTLSWAIYMVMTHAHVADKLYLELKNFEENSAKEENISLPQCDKEDSESFNQRVEQFSRLLNKDSLERLHYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAPSFVPERWFKDGVLKNESPFKFTAFQAGPRICLGKDSAYLQMRMVLAILCRFYKFNLVSGHIVKYRMMTILSMAHGLKVTIEQRS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02112 515 Coils Coil 318 338 - -
Spst4g02112 515 PANTHER CYTOCHROME P450 15 508 - -
Spst4g02112 515 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 Gene3D Cytochrome P450 11 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 FunFam Alkane hydroxylase MAH1 21 515 - -
Spst4g02112 515 Pfam Cytochrome P450 27 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 SUPERFAMILY Cytochrome P450 26 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02112 515 CDD CYP86A 59 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02112 Spst-Chr4 61925782 61928220 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02112 1 515 Cytochrome P450 AT1G69500 75.000 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02112 K20495 - gmx:100787802 971.844