Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02095 ATGGAGAATCGGAAGACATCGGCGTACTATGAGAACAGAGCGGTGCAGTTTGGCGTAGTGAGCACCGAGTGGCTTGCTCAGGCTCAATCCGCCACTGTCCATCCTGCCCCATCTCCTCCTCTTCCTCCATCTCATAATGACGCCGACAAACCTTTCTCCGTCATCGAGGAGTTCAACGCGTGGCGTAAACATCCCGATTTGGCGGAGGCCGTGGCCGCCATTCGCGCCTTGGCCGCCGTCATCCGCTCCAGCAAGGCCACCACCATGATGCAGCTCGAAATCCAACTCAAAAGCGCCTCCGATTCTCTCAAACGTTGGGATACGACCTCTATCTCTTTAACCGCCGCCTGCGATCTCTTCATGCGATACGTCACCAGGACTTCCGCTCTGGAATACGAAGACTTCAATTCCGCCAAGTCTCGCTTGCTCGAACGCGCTGAAAAATTCGGCGAAATCTCCTTCAAGGCTCGCAATATCATTACAATGCTGAGCCAGGATTTTATATTCAACGGTTGCACAATTCTTGTTCACGGTTTCTCCAGAGTCGTACTTCAGATTCTTAAATTCGCCGCACAGAATAACAAGCTCTTTAGAGTCTTCTGCACAGAGGGGAGACCGGATAGAACGGGTTTGCGGTTGTCCAATGAGCTGGCCAAGCTTGATGTGCCTGTGAAGCTTGTTATAGATTCTGCAGTGGCGTATACTATGGACGAGGTTGACATGGTATTTGTTGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATCAACATGATGGGGACTTACCAAATTGCAATGGTCGCCAAGAGTATGAACAAGCCAGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGGTTTTACCCTCTGGACCAAAAGGATTTGGCCCCTGCCTTACGCCCAGTTGATTTTGGTGTGCCTATTCCATCCAAGGTTGAGGTTGAATGTTCCGCGCGAGATTATACTCCTCCTCAGTATCTCACTCTGCTTTTCACCGATTTAGGTGTTCTCACTCCATCAGTTGTTAGTGATGAACTCATCCAGCTATACTTGTAG 1056 0.4981 MENRKTSAYYENRAVQFGVVSTEWLAQAQSATVHPAPSPPLPPSHNDADKPFSVIEEFNAWRKHPDLAEAVAAIRALAAVIRSSKATTMMQLEIQLKSASDSLKRWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLLERAEKFGEISFKARNIITMLSQDFIFNGCTILVHGFSRVVLQILKFAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMNKPVYVAAESYKFARFYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02095 351 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 19 351 - -
Spst4g02095 351 FunFam Translation initiation factor eIF-2B subunit alpha 50 152 - -
Spst4g02095 351 Pfam Initiation factor 2 subunit family 65 339 IPR000649 GO:0044237
Spst4g02095 351 Gene3D - 50 152 IPR042528 -
Spst4g02095 351 FunFam Translation initiation factor eIF-2B subunit alpha 155 351 - -
Spst4g02095 351 SUPERFAMILY NagB/RpiA/CoA transferase-like 63 350 IPR037171 -
Spst4g02095 351 Gene3D - 155 351 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02095 Spst-Chr4 61748621 61750744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02095 7 351 Eukaryotic Initiation Factors Gene Family AT1G53880 79.429 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02095 K03239 - gmx:102669842 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02095 4 61748621 61750744 Spst4g02095 4 61748621 61750744 ECH