Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02076 ATGGTGTTGGATCCAAGGCTGGTGCTGGTGGTGTTCATCAGCACCTGCATTTTGGCCATCAATGGTGACACAGATCCAAATGACGCTGATCTCTTGAGTGACACTTGTTTACCGGTTGATGCAATTCTCGCTTCTTTACTAAATTCTATGAGAGGATTCAGCTACAAATATTGCGGTTCAATGTTGCTTCTGATCTCCATAAAGGAGTATGTATCAATCTTAATAAAGTACTTGGACCTCGTGTTACTCACATCTTGGGCTGTTAAAAGCTCACCACTCCATCGCTGCTCTTCATCCTTTGTAGTAGGTTTCAGCATTCACATGTATCATGAGTTTGACTGCTTTATTACCAATAACGTTGCTTCTCTAAAGGCTATGTTTCAAAGTATGGGCTCATCATCCCAGCTAAATTGGAATGGGGATGATCCTTGTGGACAGTCTTGGCAAGGCATCACTTGCTCTGGAAATCGAGTCACAGAGATCAAGTTACCTGGTCGTTCACTTTCCGGATCTTTGGGTTACCAACTACCCTTCTCATCGGTTACAAACCTAGACTTGAGTAACAATAATCTTGGTGGCACCATACCATACCAACTTCCTCCTAATATCCAGTACCTAAATCTTGCTAATAATAATTTCAATGGGACCATCCCTTATTCTGTCTCTAACAAGACTTCGCTTGTAGTCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTCAACGTTGATTTTCAAAAGCTTTCTTCCCTATCTACATTGGATCTCTCGTTCAATTCTTTGACTGGTGACCTGCCTCAAACATTGAGCTCACTTTCTAGCATAAGCACCATGTATCTTCAAAACAACCAGTTTACAGGAACCATTAATGTCCTTGCTAATCTGCCACTTGAAACTCTGAATGTGGGAAACAATCATTTTACAGGCTGGATACCAGAACAGTTGAATAACATAAACGTGCAAAAGGATGGTAATAATTGGAGCTCGGGACCTGCACCCCCACCTCCCCCTGGAACACCTCCAGTAGTAACTAGAAATCGAAATCATAAGTCTGGTGGACATACCCCATCAGATGATGGCTCAAGCGATGATGCAGGCAAAAAGTCTGGTATTGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAAAAGATCAAAAAAGTTTAATGACATTGAAAAGCTTGACAATCAACCCTTGGCTCCTCGTACGCAAAATTTGCATGAAATGAATTCCACGCAAACTTCATCTGTAATTGACTTGAAGACATTTGATACACCTGCGGCACCAATAAGTCTTAAACCTCCACCTTTTGATCGTCATAAATCATTTGACGAGGATGAGTTTTCAAAGAAGTCCACTGCAGTCAATAAGCCCACTACAGTCAAAAAGACTGTCACTGCTCCTACAAATGTAAAATCTTATTCCATAGCTGACCTGCAGATTGCTACTGGAAGCTTCAGTGTGGATCAACTTCTTGGTGAGGGGTCTTTTGGACGTGTATACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCTGTCAAAAAGATAGATTCATCTGTCCTTCCCAATGATTTATTTGATGATTTTGTTGAACTGGTTTCGAGCATATCCCATATGCATCATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCACGGACAACACCTACTAGTGTATGAGTTTCATAAAAATGGATCACTACATGACTTCCTTCATCTACCTGACGAGTATAGTAAACCATTGATATGGAATTCACGTGTGAAGATTGCTTTGGGGATTGCACGCGCTCTAGAGTACCTACATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCAGCCAACATATTGCTTGATACAGATCTCAATCCTCATCTTTCCGATACTGGATTGGCAAGCTATATTCCAAATGCAAATCAGGTATTGAACAATGATTCTGCCTCTGGATATGAAGCTCCCGAAGTTGGCATGTCTGGGCAATATACTCTTAAGAGTGATATATTTAGTTTTGGAGTTATCATGTTGGAACTTCTTAGTGGACGGAAACCATTTGATAGCTCAAAGCCAAGGTCTGAGCAGGCTTTGGCTCGATGGGCAACGCCTCAACTCCACGATATCGATGCTCTGGCTAAAATGGTTGATCCTGCATTGGAAGGACTATACCCTGTGAAGTCTCTTTCTCGATTTGCAGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCGGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCGCTGGTTCGATTAGTGCAGCGAACTAATATGAGTAAGAGGACGTTTGGAGCTGATCAAGGAGGATCCAACCGAGGGGGAGATAATCAAGAATCACAAGACATGTAA 2418 0.4218 MVLDPRLVLVVFISTCILAINGDTDPNDADLLSDTCLPVDAILASLLNSMRGFSYKYCGSMLLLISIKEYVSILIKYLDLVLLTSWAVKSSPLHRCSSSFVVGFSIHMYHEFDCFITNNVASLKAMFQSMGSSSQLNWNGDDPCGQSWQGITCSGNRVTEIKLPGRSLSGSLGYQLPFSSVTNLDLSNNNLGGTIPYQLPPNIQYLNLANNNFNGTIPYSVSNKTSLVVLNLGHNQLQQALNVDFQKLSSLSTLDLSFNSLTGDLPQTLSSLSSISTMYLQNNQFTGTINVLANLPLETLNVGNNHFTGWIPEQLNNINVQKDGNNWSSGPAPPPPPGTPPVVTRNRNHKSGGHTPSDDGSSDDAGKKSGIGGGGIAGIVISILVVGAIVAFFLVKKRSKKFNDIEKLDNQPLAPRTQNLHEMNSTQTSSVIDLKTFDTPAAPISLKPPPFDRHKSFDEDEFSKKSTAVNKPTTVKKTVTAPTNVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDLFDDFVELVSSISHMHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEYSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDLNPHLSDTGLASYIPNANQVLNNDSASGYEAPEVGMSGQYTLKSDIFSFGVIMLELLSGRKPFDSSKPRSEQALARWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGADQGGSNRGGDNQESQDM 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02076 805 MobiDBLite consensus disorder prediction 321 368 - -
Spst4g02076 805 SUPERFAMILY Protein kinase-like (PK-like) 477 772 IPR011009 -
Spst4g02076 805 Gene3D Phosphorylase Kinase; domain 1 460 577 - -
Spst4g02076 805 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 464 577 - -
Spst4g02076 805 ProSitePatterns Protein kinases ATP-binding region signature. 506 529 IPR017441 GO:0005524
Spst4g02076 805 MobiDBLite consensus disorder prediction 351 365 - -
Spst4g02076 805 Gene3D Ribonuclease Inhibitor 117 333 IPR032675 -
Spst4g02076 805 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 111 777 IPR046959 -
Spst4g02076 805 Gene3D Transferase(Phosphotransferase) domain 1 579 792 - -
Spst4g02076 805 ProSiteProfiles Protein kinase domain profile. 500 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02076 805 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 117 338 - -
Spst4g02076 805 MobiDBLite consensus disorder prediction 783 805 - -
Spst4g02076 805 SUPERFAMILY L domain-like 130 318 - -
Spst4g02076 805 Pfam Protein tyrosine and serine/threonine kinase 502 772 IPR001245 GO:0004672|GO:0006468
Spst4g02076 805 PRINTS Leucine-rich repeat signature 181 194 - -
Spst4g02076 805 PRINTS Leucine-rich repeat signature 248 261 - -
Spst4g02076 805 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 578 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02076 Spst-Chr4 61588515 61596149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02076 101 804 Strubbelig Receptor Gene Family AT1G53730 63.827 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Spst4g02076 PK_Tyr_Ser-Thr 4.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02076 - - gmx:100780323 1186.4