Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02069 ATGGCTTCCTCTTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCCACTCCAAGTTCCCAGAAGAATGGATCACTCTTGGGAACCACAAAAGCTTCTTTCCTCAGTGGGAGGAAACTGAAGGTGAACAGTTTTACAGCCCCAGTTGGAGCACGATCCAGCACTACTGTGTGTGCAGTTGCTGACCCTGATAGACCTCTGTGGTTTCCCGGAAGCACCCCTCCTCCATGGCTAGATGGCAGTTTGCCAGGAGATTTTGGGTTTGATCCTCTCGGTCTTGGATCTGATCCTGAGAGCCTGAGGTGGAATGTTCAGGCAGAGCTTGTGCATTGCAGATGGGCCATGTTGGGTGCTGCTGGCATTTTCATCCCAGAATTCCTCACAAAGATTGGTGTCCTTAACACCCCTTCATGGTACACTGCTGGAGAGTTGGAGTACTTCACAGATACTACGACACTCTTCATAGTTGAGCTCTTTTTCATTGGGTGGGCTGAGGGTAGAAGGTGGGCTGACATCATCAAGCCCGGCAGTGTCAACACTGATCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGATCCACTTGGCTGGGGAAGTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACTGGGACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCAGGCCATGCTACTATTTTTGCTGTAAGTTCACTCAACAACTAG 816 0.5012 MASSCASSAIAAVAISTPSSQKNGSLLGTTKASFLSGRKLKVNSFTAPVGARSSTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAVSSLNN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02069 271 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Spst4g02069 271 SUPERFAMILY Chlorophyll a-b binding protein 60 265 - -
Spst4g02069 271 FunFam Chlorophyll a-b binding protein, chloroplastic 75 260 - -
Spst4g02069 271 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Spst4g02069 271 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 25 266 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02069 Spst-Chr4 61506106 61507689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02069 46 265 Chloroplast and Mitochondria Gene Families AT3G61470 88.688 1.72e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02069 K08908 - gmx:100784089 533.872