Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02056 ATGATAAATATAGATTGCAGGGTGATAGGGGATTACATAGTGGGTCCTCTGATTGGATGCGGTTCGTTTGCAGTGGTGTGGCGATCAAGAAATAGAGTTTCAGGTTTAGAGGTTGCGATTAAGGAGATTGAGATTAGACAACTCAATCCCAAAATTAGGGAAAATCTTCTCAAAGAGATCTCTATCCTTAGCACCATCCAGCATCCCAACATCATTAGACTCATAGAAACAATTGAAACCGATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTTGCTACATACATCCAGCGCCATGACAAAGTTTCTGAAACTGTTGCACGCCATTTCATGAGGCAATTGGCTGCCGGGTTACTGGTGCTTCAAGAGAAGAATCTCATTCACAGAGATTTAAAACCAGAGAATTTACTACTGACAACTACTGAAGCTATGCCAATTATGAAAATTGGAGATTTTGGTTTTGCAAGGTCTCTCACACCCCAGGGATTGGCTGATACACTATGTGGTTCACCCTATTACATGGCTCCAGAGATTATTGAAAATCAAAAGTATGATGCCAAGGCTGATTTATGGAGTGTTGGAGCAATATTGTATCAACTAGTAATTGGGAAGCTACCATTTAACGGAACTACTCAATATCAGCTTTTTCGAAATATTTTAGAATCCACTGAATTGTACTTTCCGCCAGAGGCCTTAGAAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAATCTTTTACGTCAAAATCCAGATGAGAGATTAACATTCAAGGCATTCTTCAATCACAATTTCCTTCAGAAACCCAGGTCAACAGGGAATGTTAAGCAGTTTCATTTACATCAATCAGGTGGCTCTGTCTCCGAGATGTCTCAATCACAGTCTATGTATCAAATTGTAGATGCCACTGAAAGCATGTTGTTGCAAAGAAAGGATGTTTCCCCTTTAATGCAGTCTATCGAGAAAGATTATGTCCTTGTCAATTCCCATTTTGCATCATTGGAGACTTTTTCTGACTACTTTGAGGCATCTGTGGAAGATAATTCCTCAGGCAGGATTTCTCTCATTCCTTCGAAGTGGACTAATCTGGAGATTGGAGTTGTGAAACAAACAAAGAATCTTTCCTCTTCCTCCACTGAAGGATTAGAGAATTTAAAGAACAATAAACTTGAGGCATGTGTGGCATCCTCTGAATTTACTGCTTTAACGAAAGAGCATGACATTTCCTCACTACACCTTTCAAACAGGTTAGTGTTGTTGCATCATTATGTGAAGATCCTTGAAGAACTTTCACAAGAAAAGTGTAATACAGGACTGTATCTGGAGTCACTTGCAGTTGAGTTGGTGGTTTTGGCTATATGGAAAAAGGCACTAGAAATTTGTAACTCTTGGCTAGTCTCCCTTGATAAGAGTGAGTTGCCTGAAAGCAGTTCAGTTAATGAATCCATATCTTCAATTGATGTGGATATATCACAAAATACAGGACAGAAAATAAATTTTAGTGATCCTCCATCTGTCGCCATGTGGGCAAAATATGAGTTTGTTGTTGCTGTTGATCGTGCTGAGAAATTATCATGTCGTATTCAAAATATGGATGGTAGGACTTCTTTATGTTTCTGA 1632 0.3928 MINIDCRVIGDYIVGPLIGCGSFAVVWRSRNRVSGLEVAIKEIEIRQLNPKIRENLLKEISILSTIQHPNIIRLIETIETDDRIYLVLEYCAGGDLATYIQRHDKVSETVARHFMRQLAAGLLVLQEKNLIHRDLKPENLLLTTTEAMPIMKIGDFGFARSLTPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGKLPFNGTTQYQLFRNILESTELYFPPEALEELHSDCLDLCRNLLRQNPDERLTFKAFFNHNFLQKPRSTGNVKQFHLHQSGGSVSEMSQSQSMYQIVDATESMLLQRKDVSPLMQSIEKDYVLVNSHFASLETFSDYFEASVEDNSSGRISLIPSKWTNLEIGVVKQTKNLSSSSTEGLENLKNNKLEACVASSEFTALTKEHDISSLHLSNRLVLLHHYVKILEELSQEKCNTGLYLESLAVELVVLAIWKKALEICNSWLVSLDKSELPESSSVNESISSIDVDISQNTGQKINFSDPPSVAMWAKYEFVVAVDRAEKLSCRIQNMDGRTSLCF 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02056 543 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 7 484 IPR045269 GO:0004674|GO:0006914
Spst4g02056 543 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02056 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Spst4g02056 543 FunFam Aurora kinase A 5 94 - -
Spst4g02056 543 CDD STKc_ATG1_ULK_like 18 269 - -
Spst4g02056 543 SMART serkin_6 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02056 543 ProSiteProfiles Protein kinase domain profile. 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02056 543 FunFam Maternal embryonic leucine zipper kinase 5 310 - -
Spst4g02056 543 Gene3D Transferase(Phosphotransferase) domain 1 5 337 - -
Spst4g02056 543 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Spst4g02056 543 SUPERFAMILY Protein kinase-like (PK-like) 8 312 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02056 Spst-Chr4 61390261 61394564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02056 8 285 CBL-interacting serine-threonine protein kinases AT2G30360 35.211 5.13e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Spst4g02056 Pkinase 2.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02056 - K08269 gmx:100779262 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02056 4 61390261 61394564 Spst4g02056 4 61390261 61394564 ECH