Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02047 ATGGAAGCACAAAGCTCTCAGCAAACGCAGGTTATTGAGATCAGTGGAGATTTTTCTGATGGCGGAAGAAAGATTTGTGGGGAAGCACCATGTGGGTTTGCAGATGCTGGATCCATCTCCAAGGATTCTGCAGAAAGATCAACTTCTATGCGAAAGCTCCTTATGGCAGTGGTCCTGTGTGTTATTTTTATGACTGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATACTGACTGATGCAGCACATTTGCTTTCTGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAATCATATGGATTTTTCCGAATAGAGATTCTTGGTGCCTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGTATTCTGGTATATGAAGCCATTGATAGAATCGTTGCTGGTCCTAAAAGCGTGAATGGTTTCTTAATGTTTTTAGTTTCGGCATTTGGTCTCGTAGTTAATATCATCATGGCTCTGTTATTGGGTCATGATCACAGTCATGGACATGATGGTCATGGTCACGGGCATGGACATGATGGTCATGGTCATGGGCACAGTCATGGATTTACAGTGTCTACCCATCATGATGCAAAACATACAAAAGATGAGCACCATCACACACATGATGATCACACAGACCATCATGATGAAAAACATTCAAAATATCCTATCCATCATACTCATGAAGATCACTTGCACCATCATGATCACAATGAGGTTACTGAATCTCTTCTTGAAAAATCGAAAGGTGGAACTAAGAGGAAGAAGCAGTGGAACATAAATGTACAGGGGGCTTATCTCCATGTTCTTGGGGACTCTATTCAGAGTATTGGAGTAATGATTGGGGGAGCAGTCATATGGTATAAACCTGAGTGGCAAATAGTTGATTTAATTTGCACTCTAATATTTTCAGTAATTGTTTTGGGGACAACCATCAATATGCTGCGAAACATCTTGGAAGTCCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTAAGCTTGAAAGGGGGCTGTTGGATATGGAAGATGTAGTGGCTGTTCATGAATTGCATATATGGGCCATTACGGTGGGAAAGGTTTTACTAGCTTGCCATGTTAAAATCAGACGTGAAGCAGATGCAGACATGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTCTATAACATCAGTCATGTAACCATACAGATAGAGCGCTAG 1248 0.4191 MEAQSSQQTQVIEISGDFSDGGRKICGEAPCGFADAGSISKDSAERSTSMRKLLMAVVLCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIVAGPKSVNGFLMFLVSAFGLVVNIIMALLLGHDHSHGHDGHGHGHGHDGHGHGHSHGFTVSTHHDAKHTKDEHHHTHDDHTDHHDEKHSKYPIHHTHEDHLHHHDHNEVTESLLEKSKGGTKRKKQWNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADMVLDKVIDYIKRVYNISHVTIQIER 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02047 415 NCBIfam cation diffusion facilitator family transporter 50 415 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Spst4g02047 415 Pfam Cation efflux family 53 337 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Spst4g02047 415 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 338 IPR027469 -
Spst4g02047 415 MobiDBLite consensus disorder prediction 182 267 - -
Spst4g02047 415 Gene3D Cation efflux protein transmembrane domain 49 336 IPR027469 -
Spst4g02047 415 MobiDBLite consensus disorder prediction 182 268 - -
Spst4g02047 415 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 19 415 - -
Spst4g02047 415 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 343 414 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02047 Spst-Chr4 61270291 61271538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02047 24 415 Inorganic Solute Cotransporters AT3G61940 59.288 9.19e-144 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02047 K14689 - gmx:100790458 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02047 4 61270291 61271538 Spst4g02047 4 61270291 61271538 ECH