Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02018 ATGGGTCCAATTAGGCGGGTTCAATTCGCCCCCACTTCCCGCCGTGAGGCCCTCCGATGTGCTGACGTCCACATGGGTCAGTGCTACGGCAAGTCCAATCTCACGCCGGAAAATGACGCTACCGCCGCCGAGGACACTACAGTCGATACCGTTGTTGCGGTGGCCGGATCCGCTGACGCCCCAGTCTCTCCCCTTCCAGTGAAGGGGACGCCGGCGCGGGCGAGTCCCTGGCCCAGTCCCTACCCACATGGTGGTGGGGTCACGCCTTCCCCGGCTAGAGGCACGCCGAGGAGGTTTTTCCGGCGTTCGTTCGCGCCGCCATCGCCAGCGAAGCATATAAGGGCATCGCTGGCGAAGCGGCTTGGGCACGCGAAGACTCCGAAAGAGGGGCCGATCCCGGAGGAAGAAGCGGCAGCAACGGGGGCGACGGAACAGTCGCTGAATAAGAGCTTTGGGTATGGTAAGAATTTTGGGGCGAAGTATGAAATTGGGAAAGAAGTGGGTCGAGGGCATTTTGGTCATACTTGTTATGCTAAGGGGAAGAAGGGTGAACTCAAAGATCAACCTGTTGCTGTTAAAATCATTTCCAAGGCGAAGATGACAACTGCAATAGCAATTGAAGATGTTCGAAGAGAGGTGAAGATATTAAAAGCTCTATCTGGCCATGAACATCTTGTCAAATATCATGATGCTTTTGAAGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGGATTTTGTCAAGGGGAGGAAAGTATTCAGAGGAGGATGCCAAGGTAATAGTTTTGCAGATCCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTGCACCGAGACCTTAAACCTGAGAATTTCCTCTTCACTTCAAGAAGTGAAAATGCTGACATGAAGCTTATTGATTTCGGTCTATCTGACTTCATCCGGCCAGATGAACGGCTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTGGAAGCAGATATATGGAGTATTGGTGTTATCACCTACATCTTATTATGCGGAAGTAGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTGCAGTGCTTAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCTACTGTCTCTGCGGAGGCCAAGGACTTTGTAAAACGGCTTCTAAACAAGGACTACAGGAAAAGAATGACAGCTGTCCAAGCTCTAAGTCATCCTTGGTTGAGGGACGACAGCCGTCCAATCCCTTTAGATATATTAGTTTATAAACTAGTGAAGGCTTATCTTCATGCAACACCACTCAAACGTGCAGCAGTGAAGGCCCTTTCAAAAGCCTTGCCAGAGGATGAATTGCCCTACCTAAGAGCACAATTCAGATTGTTGGAACCAAATAGAGACGGACTCATCTCCCTTGACAATTTCAAAATGGCTCTTGTACACAATGCAACTGATGCAATGAGAGAGTCAAGGGTTGTTGAGATCATAAATGCGATGGAGCCACTTGCCTATAGAAAGATGGACTTTGAAGAGTTTTGTGCAGCTGCAATTAGCACATACCAATTGGAAGCACATGATAGGTGGGAAGATATTGCCTCAACTGCATTTGAACATTTTGAGACAGAAGGCAACCGTCTGATATCAGTTGAAGAATTAGCCAGAGAGTTGAATCTTGGGCCTTCAGCTTATTCAATTCTCAAGGACTGGATAAGAAATACTGACGGGAAGCTCAGTTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGTAGTTCAAACCCAAGACACAGGTAG 1842 0.4756 MGPIRRVQFAPTSRREALRCADVHMGQCYGKSNLTPENDATAAEDTTVDTVVAVAGSADAPVSPLPVKGTPARASPWPSPYPHGGGVTPSPARGTPRRFFRRSFAPPSPAKHIRASLAKRLGHAKTPKEGPIPEEEAAATGATEQSLNKSFGYGKNFGAKYEIGKEVGRGHFGHTCYAKGKKGELKDQPVAVKIISKAKMTTAIAIEDVRREVKILKALSGHEHLVKYHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSENADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALSHPWLRDDSRPIPLDILVYKLVKAYLHATPLKRAAVKALSKALPEDELPYLRAQFRLLEPNRDGLISLDNFKMALVHNATDAMRESRVVEIINAMEPLAYRKMDFEEFCAAAISTYQLEAHDRWEDIASTAFEHFETEGNRLISVEELARELNLGPSAYSILKDWIRNTDGKLSLLGYTKFLHGVTLRSSNPRHR 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02018 613 FunFam CDPK-related kinase 1 154 249 - -
Spst4g02018 613 FunFam Calcium-dependent protein kinase SK5 333 432 - -
Spst4g02018 613 Gene3D Phosphorylase Kinase; domain 1 155 249 - -
Spst4g02018 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Spst4g02018 613 SUPERFAMILY Protein kinase-like (PK-like) 153 441 IPR011009 -
Spst4g02018 613 Gene3D Transferase(Phosphotransferase) domain 1 250 431 - -
Spst4g02018 613 FunFam CDPK-related kinase 1 459 531 - -
Spst4g02018 613 Gene3D - 432 603 - -
Spst4g02018 613 FunFam CDPK-related kinase 3 153 325 - -
Spst4g02018 613 Pfam Protein kinase domain 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02018 613 MobiDBLite consensus disorder prediction 63 143 - -
Spst4g02018 613 CDD STKc_CAMK 160 422 - -
Spst4g02018 613 SUPERFAMILY EF-hand 457 602 IPR011992 -
Spst4g02018 613 ProSitePatterns Protein kinases ATP-binding region signature. 167 193 IPR017441 GO:0005524
Spst4g02018 613 ProSiteProfiles EF-hand calcium-binding domain profile. 464 499 IPR002048 GO:0005509
Spst4g02018 613 ProSiteProfiles Protein kinase domain profile. 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02018 613 MobiDBLite consensus disorder prediction 71 85 - -
Spst4g02018 613 PANTHER SERINE/THREONINE-PROTEIN KINASE 145 588 - -
Spst4g02018 613 SMART serkin_6 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02018 Spst-Chr4 60878654 60891419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02018 25 607 EF-hand Containing Proteins AT3G50530 59.019 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst4g02018 Pkinase 4.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02018 K13412 - gmx:100796256 1050.04