Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02010 ATGACAACCCACATTGATAATCTGTGGGTGTTGGCCTTGGCCTCCAAATGCACTCAAGAGAACATTGCATGGTCACTTTTGATCATGGCATCTCTCTGGCTCACCATGGCTTTCTTCTACTGGTCTCACCCGGGTGGTCCTGCTTGGGGCAAGTACTACTCCTTCCATTACTGGAAAAAAACCACCTCAACCAACAACCTTAACCTTTCCTCGGATACTAACAAAATGATTCCCGGTCCCAAAGGCTACCCCATGATCGGGAGCATGAACCTCATGGCCTCCCTCGCGCACCACCGTATCTTTGCGGCGGCCAAGGCATGCAACGCCATGAGGCTCATGGCCTTCAGCCTCGGGGACACACGTGCCATAGTCACGTGCCACCCCGACGTTGCCAAGGAGATTCTCACCAGCTCTGTCTTCGCTGATCGCCCAATCAAGGAATCCGCCTACAGCCTCATGTTCAACCGCGCCATCGGCTTCGCCCCCTACGGGGTCTACTGGCGCACCCTCCGCCGCATCGCCGCCACGCACCTCTTCTGCCCCAAGCAAATCAAGGCCTCAGAGCTCCAACGCGCCGAAATCGCCGCCCAAATGATCCGCTCCTTCCGGAACCGCCGCGGCGCCTTCCACCTCCGCCAGGTTCTGAAAAAATCGTCTCTGAACAATATGATGTGGTCGGTGTTCGGACAAAGATATAAGCTGGACGAGGCAAACGCAGAAATGGAGGAGCTTTCCCGGTTAGTGGAACAGGGGTACGATTTATTGGGTACCCTTAATTGGGGTGACCATATCCCCTTTCTCAAAGATTTTGACCTCCAGAAAATCCGGTTCACTTGCTCCAAACTCGTCCCCAAAGTGAACCGGTTCGTTGGTTCAATCATCGCCGACCACCAAGCCGACATAACCCAAACTAACCGCGATTTCGTTCATGTTTTGCTCTCTCTCCAAGGTCCCGATAAATTGGCTCACTCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGGGGGACCGACACGGTGGCGGTTTTGATTGAGTGGATACTAGCAAGGATGGTGCTTCATCCCGAGGTGCAAAAGAGGGTGCAAGAGGAGCTGGACGAGGTGGTCGGGGTTGGTAGGTCACGTGCTTTGACGGAGGAGGACGTGGCGGCGACGGTCTATCTACCGGCGGTAGTGAAGGAGGTTCTGAGGATACACCCTCCAGGCCCGCTTCTCTCCTGGGCCCGCTTGGCCATAACTGATACGACCATTGATGGGCATCATGTGCCCGCGGGGACCACGGCTATGGTTAATATGTGGGCCATAGCACGGGACCCGGAGGTGTGGGAGGACCCACTGGAATTTAAGCCCGAGAGGTTCCTGGGCTTGGAGAGCGAGTTTTCTGTTTTCGGGTCGGATCTGAGACTCGCCCCATTCGGATCGGGGCGAAGGACTTGCCCAGGGAAGAGTCTGGGTTTGAGCACCGTGACCTTCTGGGTGGCGAGTCTCTTGCACGAGTTTCAATGGCTACCGTCCGATGAAGCCAATGGGGTTGATCTAACGGAGGTTCTCAGGCTCTCTTGCGAAATGGCTAACCCCCTCAGTGTTAAAGTGCGCCCTAGGCGTGGACTAAGAACTTAA 1623 0.5514 MTTHIDNLWVLALASKCTQENIAWSLLIMASLWLTMAFFYWSHPGGPAWGKYYSFHYWKKTTSTNNLNLSSDTNKMIPGPKGYPMIGSMNLMASLAHHRIFAAAKACNAMRLMAFSLGDTRAIVTCHPDVAKEILTSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASELQRAEIAAQMIRSFRNRRGAFHLRQVLKKSSLNNMMWSVFGQRYKLDEANAEMEELSRLVEQGYDLLGTLNWGDHIPFLKDFDLQKIRFTCSKLVPKVNRFVGSIIADHQADITQTNRDFVHVLLSLQGPDKLAHSDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPEVQKRVQEELDEVVGVGRSRALTEEDVAATVYLPAVVKEVLRIHPPGPLLSWARLAITDTTIDGHHVPAGTTAMVNMWAIARDPEVWEDPLEFKPERFLGLESEFSVFGSDLRLAPFGSGRRTCPGKSLGLSTVTFWVASLLHEFQWLPSDEANGVDLTEVLRLSCEMANPLSVKVRPRRGLRT 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02010 540 Pfam Cytochrome P450 78 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 FunFam Cytochrome P450 78A5 69 535 - -
Spst4g02010 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Spst4g02010 540 PANTHER CYTOCHROME P450 78A7-RELATED 1 536 - -
Spst4g02010 540 Coils Coil 234 254 - -
Spst4g02010 540 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 CDD CYP78 108 528 - -
Spst4g02010 540 SUPERFAMILY Cytochrome P450 77 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02010 540 Gene3D Cytochrome P450 65 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02010 Spst-Chr4 60754153 60755936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02010 1 536 Cytochrome P450 AT2G46660 63.419 0.0 686