Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01994 ATGAATTCTGGTGCTGTCTTGACACTGCCTCCTGTGAGCAATGTGTTCACGACAAGGGAGCCTCAGGATATTGAGGACGAGTTTGTGGAGAAAGATCCAACCGGACGGTATATAAGGTACACTGAAGTCTTGGGAAGGGGTGCCTTCAAAACTGTTTATAGGGGCTTTGATGAAGTTAACGGAATTGAAGTTGCTTGGAACCAAGTGAAGATTGATGGCCTCTTGCATACAGTCGATGATCTTGCAAAGTTGTATTCTGAAGTTAATCTATTGAAGCCTTTGAAACATGAAAATATTATTAAGTTCTATGATTCTTGGATTGATGATAAGCAGAACACTGTTAACATGATCACTGAACTCTTCACATCAGGAAATTTAAGGCAATATCGCAAGAAGCATAAATATGTTGAAATGAAAGCTATAAAAGGTTGGGCCAGGCAGATTCTTCATGGCTTAATCTATCTTCACAGTCACAAGCCACCAATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGTGAAGTTAAGATAGGGGACCTTGGTTTGGCAATTGTCATGCAACAACCCACCGCCCAAAGTGTTATTGGAACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGTCGTACACAGAACTGGTTGACATCTATTCTTTCGGAATGTGCATATTGGAGATGGTCACTTTTGAGTATCCCTATGCCGAATGCAAAAATCCAGCTCAAATCTTTAAGAAAGTTACCTCAGGCATCAAACCTGCTTCCCTTAAAAAGGTGAGTGATCCTCAAATTAAGGAGTTTATTGAGAAATGTCTGGTTCCAGCATCTGAGAGATTGTCAGCAGAGGAGCTTCTTAAAGATCCATTTCTACAAGTTGAGAATCCAAAGGATCCCGTCCTCTATCCTGTACAACCACCTAGAAGAACACTGAGAGCATATTCATTTAAGTCTGGTTCTCAATCTATGGACTTGGATGCTGACTGCAAACAGTTATCTACGAGTATATGTTCTGAAAGCAACCAGGAAATCCCATATTGTCCTGTTTTTGAAGTGCAGAGGGCAAATAATAACAATGAGTTTAGGCTGAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCTGATACATGTGCAGGTCGAGTAAGGAATATACATTTTCTCTTTTACCTCGATTCAGATACCGCTGTCTCTGTGGCCACAGAGATGGTTGAGCATTTGGAGCTGGCAGATCACGATGTACCCTTCATAGCGGAGCTTATTGATTACTTGATAATGAAACTTCTCCCTTGGTGGAATCCCTCGCATGACCGTTGCTTGTGTGGAGAAACAAATCCTAATATAGATGGCCAAAGCTTCATGGGATGGCCATGGGGTTCTGTCCTAGCAAGTATTCCCTCTGAAATGGTTATTGGAGAAGATGGCTTCTCTGGGTTTGATACAAGCTCCAAAGAAGAGTTTGTGGCAGCTGAGAAGACCAGCTTTATCAAAAATGATGATAATGCTACTTTTGAGGGTGATGCTAATTCACAAGAATCTGGAGCTTCTGAGGTAGTTGTTGAAAATGCTTCTATGAAAGATGACAATTGTCACGATTCCAAAGTTGATGCAAGTTCTAAATGCTCAAGTAGTAGGTCCATCTCTGAACTTGAGCTAGGGGATGCATATTTTGAGGAATGTAAATTGCAACCACAAGATTATTGTGCCGCGGAAGAAGTTGTTATAAATGAATACCCAAAGAACCCGGGATCAGTTCTTGGAACATCCACAAATGCTGGAAGCACAAGAAGTAGCTGTTCGTATGTGTCTTCAACAGAAGAGGAGATTGATCTTGAGCTACAGTTTGAACTTGATGTCCTTGAGTCACACTATCAACATTGGATTAATGAACTAAACAAGATGAAGTTGGACGCATTGGAATCCACCAGAAAGAGATGGATGGCCAGGAAGAAACTGGCTATTTGGCGATTTGGCGATTTTGAGCTTGTTGATTGA 2022 0.41 MNSGAVLTLPPVSNVFTTREPQDIEDEFVEKDPTGRYIRYTEVLGRGAFKTVYRGFDEVNGIEVAWNQVKIDGLLHTVDDLAKLYSEVNLLKPLKHENIIKFYDSWIDDKQNTVNMITELFTSGNLRQYRKKHKYVEMKAIKGWARQILHGLIYLHSHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTAQSVIGTPEFMAPELYEESYTELVDIYSFGMCILEMVTFEYPYAECKNPAQIFKKVTSGIKPASLKKVSDPQIKEFIEKCLVPASERLSAEELLKDPFLQVENPKDPVLYPVQPPRRTLRAYSFKSGSQSMDLDADCKQLSTSICSESNQEIPYCPVFEVQRANNNNEFRLKGTKNDDNSVSLTLRIADTCAGRVRNIHFLFYLDSDTAVSVATEMVEHLELADHDVPFIAELIDYLIMKLLPWWNPSHDRCLCGETNPNIDGQSFMGWPWGSVLASIPSEMVIGEDGFSGFDTSSKEEFVAAEKTSFIKNDDNATFEGDANSQESGASEVVVENASMKDDNCHDSKVDASSKCSSSRSISELELGDAYFEECKLQPQDYCAAEEVVINEYPKNPGSVLGTSTNAGSTRSSCSYVSSTEEEIDLELQFELDVLESHYQHWINELNKMKLDALESTRKRWMARKKLAIWRFGDFELVD 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01994 673 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01994 673 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01994 673 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01994 673 CDD STKc_WNK 36 295 - -
Spst4g01994 673 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Spst4g01994 673 SUPERFAMILY Protein kinase-like (PK-like) 39 341 IPR011009 -
Spst4g01994 673 Gene3D Transferase(Phosphotransferase) domain 1 121 300 - -
Spst4g01994 673 FunFam Probable serine/threonine-protein kinase WNK1 22 119 - -
Spst4g01994 673 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 434 IPR024678 GO:0004674|GO:0005524
Spst4g01994 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Spst4g01994 673 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 23 643 - -
Spst4g01994 673 FunFam probable serine/threonine-protein kinase WNK9 121 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01994 Spst-Chr4 60642845 60646317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01994 25 445 MAP Kinase Kinase Kinase AT5G41990 60.606 7.23e-171 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst4g01994 Pkinase 2.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01994 K08867 - gmx:100809602 1107.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01994 4 60642845 60646317 Spst4g01994 4 60642845 60646317 ECH