Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01976 ATGGGAAAGGAACAATTGCAGGTGCTTAATACACTAGATATTGCCAAAACACAATGGTACCATTTTACAGCAATTGTGATTGCTGGAATGGGTTTCTTCACTGATTCTTATGATCTGTTCTGCATATCCCTTGTCACCAAATTGCTTGGCCGCATATACTACACTGAAGGTCACAACAGGCCTGGCTCACTACCAGCAAATGTTTCTGCCGCCATCAATGGTGTTGCATTCTGTGGAACTCTTGTAGGTCAGCTTTTCTTTGGGTGGCTTGGTGACAAAATGGGAAGGAAGCGTGTCTATGGGATGACCCTTATGCTCATGGTCATAAGCTCAATTGCTTCTGGTCTTTCCTTTGGCAAAGACCCTAAAGCTGTTATATCTACCCTTTGCTTCTTTCGTTTTTGGCTTGGATTTGGCATTGGTGGGGACTACCCTCTTTCAGCCACTATCATGTCAGAGTATGCCAACAAGAAGACTCGTGGAGCATTCATAGCTGCTGTTTTTGCCATGCAGGGTTTTGGAATTTTGACTGGTGGCATGGTTGCAATTGTAGTTTCAGCTGCTTTCAATGCCCTCTACCCCGCTCCATCATTCAAGATTAATCCAGTTTTGTCCACAGTGCCGCAAGCTGATTATGTTTGGAGGATAATCTTGATGTTTGGTGCACTCCCAGCTCTGATCACATACTATTGGCGCATGAAAATGCCTGAGACTGCAAGATACACTGCCTTGGTTGCCAAGAATGCTAAGCAAGCAGCTGTTGATATGTCAAAGGTGCTACAAGTTGAGATAGAAGCTGAAGAAGAAACGGATGAGCAATTGGACGTAACAAGAGGAAGGGGGAATGAGTTTGGCTTGTTCACAAAACAGTTCCTTCTCCGCCATGGACTTCACCTTGTTGGAACAACCACTACTTGGTTCCTCTTGGACATTGCCTATTACAGTCAGAATCTTTTCCAAAAAGACATCTTTAGTGCAATTGGTTGGATTCCAGAAGCAAAAACCATGAATGCCATTCAAGAGGTTTTCAAAATTGCCAGAGCACAAACCCTCATAGCCCTTTGCAGTACCATCCCTGGTTACTGGTTCACAGTGGCATTCATTGACAAGATGGGCAGGTTTACAATCCAGCTTATGGGCTTTTTCTTTATGACTGTCTTCATGTTTGCCTTAGCCATTCCATACCACCACTGGACAATGAATGGCAACCAGATCGGGTTTGTTGTGATATATTCATTGACCTTCTTCTTCGCCAATTTTGGTCCGAATGCGACAACATTCGTGGTGCCTGCAGAGATTTTCCCTGCAAGGCTAAGGTCAACATGTCATGGCATATCAGCTGCAGGTGGCAAAGCTGGGGCAATGGTAGGGGCTTTTGGCTTCCTTTATGCTCAAAACGGCATTGGACTCAAAAACACACTTATTGTTTTGGGTGTCATTAACTTGTTAGGATTGCTCTTTACGTTCTTGGTTCCTGAATCTAAAGGAAAATCTCTTGAGGAGGTCTCTGGTGAAGTTGAACAAGACAATACTGCTACTGGAGAATCAACAATGGAGGCCGGTCTTCAAGTTTAG 1575 0.4419 MGKEQLQVLNTLDIAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRIYYTEGHNRPGSLPANVSAAINGVAFCGTLVGQLFFGWLGDKMGRKRVYGMTLMLMVISSIASGLSFGKDPKAVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILTGGMVAIVVSAAFNALYPAPSFKINPVLSTVPQADYVWRIILMFGALPALITYYWRMKMPETARYTALVAKNAKQAAVDMSKVLQVEIEAEEETDEQLDVTRGRGNEFGLFTKQFLLRHGLHLVGTTTTWFLLDIAYYSQNLFQKDIFSAIGWIPEAKTMNAIQEVFKIARAQTLIALCSTIPGYWFTVAFIDKMGRFTIQLMGFFFMTVFMFALAIPYHHWTMNGNQIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAGGKAGAMVGAFGFLYAQNGIGLKNTLIVLGVINLLGLLFTFLVPESKGKSLEEVSGEVEQDNTATGESTMEAGLQV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01976 524 FunFam Inorganic phosphate transporter 1-6 20 517 - -
Spst4g01976 524 CDD MFS_PhT 25 495 - -
Spst4g01976 524 SUPERFAMILY MFS general substrate transporter 12 503 IPR036259 -
Spst4g01976 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 496 IPR020846 GO:0022857
Spst4g01976 524 MobiDBLite consensus disorder prediction 501 524 - -
Spst4g01976 524 Gene3D MFS general substrate transporter like domains 20 265 IPR036259 -
Spst4g01976 524 Gene3D MFS general substrate transporter like domains 277 520 IPR036259 -
Spst4g01976 524 Pfam Sugar (and other) transporter 25 503 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst4g01976 524 NCBIfam phosphate:H+ symporter 11 505 IPR004738 GO:0005315|GO:0006817|GO:0016020
Spst4g01976 524 MobiDBLite consensus disorder prediction 505 524 - -
Spst4g01976 524 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01976 Spst-Chr4 60402612 60404186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01976 1 510 Inorganic Solute Cotransporters AT3G54700 78.626 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01976 K08176 - gmx:100792711 939.873