Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01939 ATGGAACAATTTAGGCAAATTGGGGAGGCACTAGGGGGATTGAAATCTGTTATGGTATTCCGGGAGAACATTCAAATCAATCAGAGGCAATGTTCTCTGTTGCTTGATGTGTTCAACATTACGTATGAGTGTATTGCAAATGAGATTATACAGAACCTGAAATTTGAAGAGAAGAATGTGAAGTGGAAGATTCTAGAACAGCCCTTGAGAGAGATACATAGGATTTTCAGAGAAGGTGAATCATACATTAGGCACTGCCTAGAAACAAAGGACTTGTGGGCAAAAGCCATTACCTTGTGCCACAACACAGATTGTGTTGAGTTTCATATACACAACTTGCTTTGGTGCATGCCAGTTGTAATTGAAGCTATTGAGTCTGCAGGAGAAGCATCAGGGTTCGATCAAGAGGAGATGCAAAGGAAGAGGATTATCAACTCTAACAAATACAGGAACGAGTACAGAGACATGAAACTTTTCCAGTGGAAATTTGGGAAGCAGTACCTCATCACTCCAGAGTTATGCCACCGTTATGATACAGTTTGGAAGGAAGATAGATGGTTCCTTTACAACAAACTTCATGAAAAGAAAGAGGAAGGTGTAACAAAATTTGAGAAGAAATTGATAGATTTGCTTTTGAAAAAATTGGAAAGATCAGAATCGCTAGCAGGGAGGCTCCTGCCAAGCTCAATATTGGTTAGTTCTAAGGACTTTCAGGTGAGGAGAAGAATGGGGAATGCGAGTCAGTACAAGGAGATTTCATGGTTAGGTGAAAGCTTTGTCATAAGACATTTTACCGGGGACATTGAAGCTTTGCAGCCTGAGATCATAGAACTTTTATCTCTCTGCCATCCACATATAATGGACTGCCTTTGTGGCTTTACTGATGAGGAGAAGAAAGAATGCTTTTTGCTAATGGAACTCATGAGCAAAACCCTTGCCACCCACATCAAAGAGATTCACGGTCCACGGAAGCGAATACCATTCTTGCTTCATGTGGCAGTTGATCTTATGCTTCAGATTGCCAGGGGAATGGAGTATTTGCATTCAAAAAAATTATATCATGGAGAACTAAACCCTTCAAGCATTCTTGTTAAGCCTAGAGGTACATCCCCAGAGGGCTACTTGCATGCCAAGGTAACTGGGTTCGGACTAACTTCTGTCAAGGATTTGAATCAGAAAGGGAACACAAATCAGAATGGAACTCTCCCATTCATCTGGTACTCTCCTGAAGTACTAGAAGAGCAAGAAAACTCAGGGGGTGCAGCAAACTCCAAGTACACACAGAAATCTGATGTTTACAGTTTTGGAATGGTTTGCTTTGAGCTTCTAACTGGCAAAGTCCCTTTTGAAGATAGTCATCTCCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAGAGACCACTTTTCCCACTCAATTCACCCAAATATGTTATTAACTTGACAAAGAGATGTTGGCATACTGACCCACATCAGCGTCCAAGCTTCTCTACCATATGTAGAGTTCTTCGTTATGTAAAAAGATTTCTTGCAATGAATCCTGGTTACGGTAGTCAGCCAGAGCCACCATTGCCAGCAGTAGATTATGGTGATGTAGAGTCGGTGCTCCTGAGGAGGTTTCCATCTTGGGGAAGTTCTGAATCATCACCTGTATCAATCATTCCATTTCAAATGTTTGCCTATCAAGTTATAGAGCGAGAAAAAATAAATGCGGTCTTTAAGGATAACTCGGAGTCAGGAAGTGATGCTTCAGCCTGTGGCGATGAACTTGTTACCTCAGGGGATGAACCGTTTCCATCCACAGCTGAAAGGAAGTCTTTGCTTGGACATGACATTATGAACAGAAGGATTACTTTGACCAGGAAATCTCTTGATTTGAAGCTCACCAAACAACAAGGTTACCTTCTGGACTTATTGCTCTTGTTGAACCCCGAAAGCGAGATCAGCCAGGCCTCCACAAATGTCCCCTCGTGCAAGAAGTTTGAGGATTACATCAGAGAACCACATAATATCAAATCCAAGGGCAATAAGAAGAGTATCTTCTGGTCATGTCTCAGACTCTGA 2067 0.419 MEQFRQIGEALGGLKSVMVFRENIQINQRQCSLLLDVFNITYECIANEIIQNLKFEEKNVKWKILEQPLREIHRIFREGESYIRHCLETKDLWAKAITLCHNTDCVEFHIHNLLWCMPVVIEAIESAGEASGFDQEEMQRKRIINSNKYRNEYRDMKLFQWKFGKQYLITPELCHRYDTVWKEDRWFLYNKLHEKKEEGVTKFEKKLIDLLLKKLERSESLAGRLLPSSILVSSKDFQVRRRMGNASQYKEISWLGESFVIRHFTGDIEALQPEIIELLSLCHPHIMDCLCGFTDEEKKECFLLMELMSKTLATHIKEIHGPRKRIPFLLHVAVDLMLQIARGMEYLHSKKLYHGELNPSSILVKPRGTSPEGYLHAKVTGFGLTSVKDLNQKGNTNQNGTLPFIWYSPEVLEEQENSGGAANSKYTQKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKRCWHTDPHQRPSFSTICRVLRYVKRFLAMNPGYGSQPEPPLPAVDYGDVESVLLRRFPSWGSSESSPVSIIPFQMFAYQVIEREKINAVFKDNSESGSDASACGDELVTSGDEPFPSTAERKSLLGHDIMNRRITLTRKSLDLKLTKQQGYLLDLLLLLNPESEISQASTNVPSCKKFEDYIREPHNIKSKGNKKSIFWSCLRL 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01939 688 PANTHER SERINE-THREONINE PROTEIN KINASE 261 508 - -
Spst4g01939 688 MobiDBLite consensus disorder prediction 577 600 - -
Spst4g01939 688 FunFam Kinase family protein 234 517 - -
Spst4g01939 688 ProSiteProfiles Protein kinase domain profile. 237 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01939 688 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Spst4g01939 688 Pfam Protein tyrosine and serine/threonine kinase 269 503 IPR001245 GO:0004672|GO:0006468
Spst4g01939 688 SUPERFAMILY Protein kinase-like (PK-like) 265 529 IPR011009 -
Spst4g01939 688 Gene3D Transferase(Phosphotransferase) domain 1 253 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01939 Spst-Chr4 60020260 60023059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01939 274 504 MAP Kinase Kinase Kinase AT5G58950 28.205 1.39e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Spst4g01939 PK_Tyr_Ser-Thr 2.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01939 - - gmx:100813704 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01939 4 60020260 60023059 Spst4g01939 4 60020260 60023059 ECH