Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01937 ATGAGAGAGGTCAAGCACCACAGCACAATGTGCAGCAGCACCACCTTCATCCTCACCCTCTTCCTCCTCATTGGACCATTCCTTTCTCTTTCCTCTTCCACACCCACCAACAGAAGAATCCTTCACCAACCCTTTCTCCCTGAAGGAGGTTCTCCACCTCCCTCAGTTCCCCCAACCCCCACTCCACAGCTCTCTCCATCACCTTCACCTCCAAACCCAAAGTACCCATTTTCCACCACACCCACCACCAATGCTTCCACACCCTTCTTCCCCACATACCCTTCTCCCCCACCTCCACCTTCTCCTTCAGCCTTTGCTTCCTTCCCTGCTAACATCTCCTCCCTCATCCTTCCCCAATCCCCCAAGTCCAAATCTTCCTCCAAAAAACTCCTCGCCGTTGCCATCGCGGCTGTCGCCTGCGCCATCGCCGTGGTCTCCCTCTCCGCCTTTGTCTACTTTCGCCGCCGACGCCAGAGCTATTCCGCTGATGAGAAAACCCTCAGATCCGACAGCAGCATCCGCCTCTTCCCTCGTGAAGCCTCCGCCTCTGCTGGCGGTGGCCGCAAACCAAGAAACACCTCTTCTACCAGCTCCGAGTTTCTCTACCTTGGCACCATTGTTAACTCCCGTGGCGGAAACGTCGATGAGCTCTCTGACCCGCGGTCCGCGGCGTTGAACCCCCGCAAAATGGACTCTCCGGAGCTTCAACCGCTTCCGCCGCTGGCGAGACAGGCTTCCAGGCTTAGAGAAGAAGCGGCGATGGTGGAGGATGATGAAGAGGAGTTCTACTCGCCGAGAGGGTCGTTGAATGGAAGAGAAGGCTCCGCCGGAACCGGATCGGGTTCCCGGCGAGTTTTCTCCGCCATTGCCGCAGAAAATTTAGTTGGTCGTAGTAGCAGTGAGTCAACCAGCTCTTCTTACTCTTCTTCCTCTTCTGCTTCTCCGGATCGCTCTCATTCCATTAGTCTCTCTCCTCCGGTAAGCATAAGCCCTAGAAGATCACAACCCAAGTCGCCTGAGAATACCATAACACACCATTCTCCACCACCTCCTCCAGCGGCGATTATAAGTACCCCGTCCTCGTCCACACTATCGTCGCCGTCACCGTCGCCGGTTCTCGGGCAACATATGCCGTCGTCGTCAATGTCGTCGACGCCGGAGCGGAGGGAGTGTCAGTCTCCATCGCTGTCGCCGCTTTCCTTGTCGCCGAAGAAAAACCAATACCCAGATGGTGAATCACCTCCACCACTTGTAGTACTTGAAAAGATGCAATCTTTTGGTTCGTCTAGGTCCAAAGACGACAGTGGGTCACCGAGATTGTCCAACGCTTCTTCCATTGGGAAGTCCTTGGCTTTTACTCTGCCGTCGCCGGATAAAAGCATGAACTTGCAGCATGGGCTGGATCAGTCTCCAACCATATCCGACGTTTCAGATCGGTATAGAAATTCTCCTTTGTCATCATTACCTTTGTCACCGACATTACTTTCATCGCCGGAGAGAGAGTTGAACCCTCAGCCTCCGCCTCAATCTCAACCTCAGCCTCAACAACCACCTCCACGGAAACACTGGGAGATTCCTGACTTGTTGACACCAATCGGCGAAACGCCGATTTTTTCAGCTCCTCAGAGGAAACAATGGGAAATTCCGGTTCTTTCAGCACCAATTGCTCCATCTTGTAGTAGTGTTATAGCCCCTCCTCCACCACCGCCACCTCCGCCGCCGCCGCCAGTTCCGCGGCAACGAAAGCAGTGGGAGATGCCACTGCCTTCTCCCGTGACGCCAGTGGGTCAACAGGTTTCGAGGCCGCCGGCGCTGACGCCACCTTCTAGGCCTTTTGTGCTGCAAACCCCAAATACGAAGGTTTCTCCAGTGGAGTTGCCACCTGGTAGTTCTCAGAATTTTGAGGAGAGTTCTGAAGAGGCATCTAAACCTAAGTTGAAGCCTTTGCATTGGGACAAAGTAAGGGCCAGCTCTGATCGTGAGATGGTGTGGGATCAGTTGAGGTCCAGCTCTTTTAAGTTGAACGAGGAGATGATTGAAACTTTGTTTGTAGTGAACACGCCAAACCCAAAACCTAAGGACACTGCTCCTCGCTCAGTTCTTGCCCCGCAAAATCAAGAGGATAGAGTGCTGGATCCTAAAAAGTCCCAGAACATAGCTATCTTGTTACGAGCACTTAATGTGACTATAGAAGAAGTGTGTGAATCACTGTTAGAAGGTATTACTGATACACTTGGAACTGAACTACTTGAAAGCTTGTTAAAAATGGCACCAAACAAGGAGGAAGAACGCAAATTAAAGGAACATAAAGATGATTCTCCAACCAAGCTTGGTCCTGCTGAGAAGTTTTTGAAGGCAGTGCTTGATGTACCCTTTGCATTTAAAAGGGTGGAAGCAATGCTTTACATAGCCAATTTTGAGTCCGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTTTGGAGGTTGCCTGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTCAAAACTGGCAACCGCATGAATGTGGGGACAAACCGTGGCGATGCACACGCATTCAAGCTTGATACGCTTCTCAAACTTGTTGATGTTAAAGGCGCAGATGGCAAAACCACTCTACTTCACTTTGTTGTACAAGAAATCATCAGAACTGAAGGAGCTCGTCTCTCAGGTACCAACCAAACACCAAGCGCGAATTTGAACGATGATGCCAAGTGTAGAAGGCTCGGTCTGCAAGTAGTGTCTAGTCTGAGTTCCGACCTAGCAAATGTGAAGAAGGCAGCTGCAATGGACTCTGAAATCCTCAGCAGTGAGGTCTCCAAACTCTCCAAAGGAATGGCACACATTGCAGAGGTTTTGCAGTTGAATGAAGCAGCAGGGTCAGATGAAAGCAGCCAGAAGTTCAGAGAGTCAATGAACAAGTTCATGAAAATGGCTGAGGAGGAGATTTTAAAAGTCCAAGCACAAGAAAGTGTTGCTTTATCCCTTGTGAAGGAGATCACAGAGTATTTTCATGGGAACTTGTCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTGAGAGACTTCTTAACAGTTCTTGATAGGGTGTGCAAAGAAGTTGGCATGATAAATGAGAGAACCATGGTTAGTTCTGCACATAGATTCCCTGTCCCAGTGAACCCTATGCTTCCACAACCCCTTCCTGGACTTGTTGGAAAGAGACAATACAATTCCTCAGATGATGATAGTCCATCTCCTTAG 3267 0.5023 MREVKHHSTMCSSTTFILTLFLLIGPFLSLSSSTPTNRRILHQPFLPEGGSPPPSVPPTPTPQLSPSPSPPNPKYPFSTTPTTNASTPFFPTYPSPPPPPSPSAFASFPANISSLILPQSPKSKSSSKKLLAVAIAAVACAIAVVSLSAFVYFRRRRQSYSADEKTLRSDSSIRLFPREASASAGGGRKPRNTSSTSSEFLYLGTIVNSRGGNVDELSDPRSAALNPRKMDSPELQPLPPLARQASRLREEAAMVEDDEEEFYSPRGSLNGREGSAGTGSGSRRVFSAIAAENLVGRSSSESTSSSYSSSSSASPDRSHSISLSPPVSISPRRSQPKSPENTITHHSPPPPPAAIISTPSSSTLSSPSPSPVLGQHMPSSSMSSTPERRECQSPSLSPLSLSPKKNQYPDGESPPPLVVLEKMQSFGSSRSKDDSGSPRLSNASSIGKSLAFTLPSPDKSMNLQHGLDQSPTISDVSDRYRNSPLSSLPLSPTLLSSPERELNPQPPPQSQPQPQQPPPRKHWEIPDLLTPIGETPIFSAPQRKQWEIPVLSAPIAPSCSSVIAPPPPPPPPPPPPVPRQRKQWEMPLPSPVTPVGQQVSRPPALTPPSRPFVLQTPNTKVSPVELPPGSSQNFEESSEEASKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDTAPRSVLAPQNQEDRVLDPKKSQNIAILLRALNVTIEEVCESLLEGITDTLGTELLESLLKMAPNKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPSANLNDDAKCRRLGLQVVSSLSSDLANVKKAAAMDSEILSSEVSKLSKGMAHIAEVLQLNEAAGSDESSQKFRESMNKFMKMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLVGKRQYNSSDDDSPSP 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01937 1088 Gene3D Formin, FH2 domain 630 1044 IPR042201 -
Spst4g01937 1088 ProSiteProfiles Formin homology-2 (FH2) domain profile. 636 1061 IPR015425 -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 557 645 - -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 47 77 - -
Spst4g01937 1088 SMART it6_source 636 1050 IPR015425 -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 424 500 - -
Spst4g01937 1088 PANTHER FORMIN-RELATED 393 1075 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst4g01937 1088 MobiDBLite consensus disorder prediction 611 637 - -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 560 582 - -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 501 521 - -
Spst4g01937 1088 Pfam Formin Homology 2 Domain 638 1035 IPR015425 -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 293 342 - -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 212 541 - -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 249 266 - -
Spst4g01937 1088 SUPERFAMILY Formin homology 2 domain (FH2 domain) 566 1047 - -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 40 81 - -
Spst4g01937 1088 MobiDBLite consensus disorder prediction 357 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01937 Spst-Chr4 60012182 60016543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01937 590 1077 FH2 protein (formin) Gene Family AT3G25500 76.423 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01937 - - var:108322602 1599.33