Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01917 ATGGGAAACAGTGAGGAAGGGAAATCTGTTAAAACTGGAAGTCCTTCTTCACCAGCAACAACTGATCAGACCAATCAGGCAAACCAGCCAAACATTCATGTCTATCCCGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCTCCATACTTCAACTCAGCCGTGGCATCTGGTCATGCTCCACACCCATATATGTGGGGTCCGCCACAGCCTATGATGCCACCTTACGGGCCACCATATGCAGCATTTTATTCTCCTGGAGGGGTTTATACTCACCCTGCAGTTGCTATGGGGACACATTCACATGGTCAAGGAGTTCCTTCTCCACCTGCTGCTGGGACTCCTTCAAGTGTGGAATCACCAACAAAATTATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGGGTTTGATGGGCTTGCAATGTCAATAGGAAATTGCAATGCTGAGAGTGCTGAGCGTGGAGCCGAAAACAGGCTGTCACAGAGTTTGGATACCGAGGGTTCCAGCGATGGAAGTGATGGCAACACTGCAGGGTCTAATCAAACAAAAAGGAAAAGAAGCCGAGAGGAAACATCAACCACTGATGGAGAAGGGAAAACTGAGACACAAGATGGGCCAGTTTCCAAAGAGACTGCATCTTCAAAACTGCTCATGTCTGCTACCCCAGCTAGTGTAGCTGGAAAGTTAGTTGGACCTGTAATTTCTTCAGCTATGACCACGGCACTGGAGCTTAGGAACCCTTTGACTGTTCATTCTAAGGAAAATCCCACAAGTGCCCCACAACCTTGTGCACCCGTGCCTCCGGAAGCTTGGTTACAGAATGAGCGGGAGCTGAAACGGGAGAGGAGGAAACAATCTAACCGTGAATCTGCTCGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGACATGTTAACTGCTGAGAATGTGTCACTGAAATCTGAAATAACTCAATTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGAGAAACACACATATAGGACAAAGGGAAGAGATAATTTTGAGCAACATTGATAGCAAGAGGGCTACACCTGTAAGTACTGAAAACTTGCTATCAAGAGTTAATAATTCCAGTTCTAATGATAGAACTGCAGAGAATGAAAGTGATTTCTGCGAGAACAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCCAGAGCTGATGCTGTGGCAGCTGGTTAA 1281 0.4606 MGNSEEGKSVKTGSPSSPATTDQTNQANQPNIHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAFYSPGGVYTHPAVAMGTHSHGQGVPSPPAAGTPSSVESPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAERGAENRLSQSLDTEGSSDGSDGNTAGSNQTKRKRSREETSTTDGEGKTETQDGPVSKETASSKLLMSATPASVAGKLVGPVISSAMTTALELRNPLTVHSKENPTSAPQPCAPVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVDMLTAENVSLKSEITQLTEGSEQMRMENSALREKLRNTHIGQREEIILSNIDSKRATPVSTENLLSRVNNSSSNDRTAENESDFCENKPNSGAKLHQLLDTNPRADAVAAG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01917 426 Gene3D - 284 337 - -
Spst4g01917 426 MobiDBLite consensus disorder prediction 382 410 - -
Spst4g01917 426 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Spst4g01917 426 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 395 IPR044827 GO:0003700|GO:0006355|GO:0043565
Spst4g01917 426 MobiDBLite consensus disorder prediction 188 203 - -
Spst4g01917 426 MobiDBLite consensus disorder prediction 204 219 - -
Spst4g01917 426 MobiDBLite consensus disorder prediction 283 310 - -
Spst4g01917 426 MobiDBLite consensus disorder prediction 113 132 - -
Spst4g01917 426 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Spst4g01917 426 Pfam Disordered region downstream of MFMR 132 262 - -
Spst4g01917 426 Coils Coil 308 328 - -
Spst4g01917 426 MobiDBLite consensus disorder prediction 1 31 - -
Spst4g01917 426 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Spst4g01917 426 MobiDBLite consensus disorder prediction 102 135 - -
Spst4g01917 426 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Spst4g01917 426 MobiDBLite consensus disorder prediction 157 219 - -
Spst4g01917 426 MobiDBLite consensus disorder prediction 160 187 - -
Spst4g01917 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Spst4g01917 426 FunFam G-box binding factor 3 284 339 - -
Spst4g01917 426 SUPERFAMILY Leucine zipper domain 284 339 IPR046347 GO:0003700|GO:0006355
Spst4g01917 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01917 Spst-Chr4 59828649 59831788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01917 1 426 bZIP Transcription Factor Family AT2G46270 47.344 1.05e-100 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst4g01917 MFMR_assoc 6.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01917 K09060 - gmx:547789 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01917 4 59828649 59831788 Spst4g01917 4 59828649 59831788 ECH