Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01894 ATGGCGGAAGAATCGGAGCACACGGCGGCTGGTGAATCGTTGCTCGACAAGATCGCCGACAAGCTCCACGGCCACGACTCTTCCTCTTCCTCCGATTCCGATTCCGACAAAAAGGAATCTTCCTCGATCAAGGATAAGGTTTTCCGCCTGTTCGGGAGGGAGAAGCCCGTTCACTCGGTCCTCGGCGGCGGAAAGCCTGCTGATGTTCTTTTGTGGAGGAATAAGAAGATATCTGCTAGTGTACTTGCTGTAGCCACTGCTATTTGGATCTTTTTTGAGTTGCTTGAATATCATCTGCTTACTCTAGTCTGTCACATTTTGATTCTGTTGCTTGCGGTTTTGTTTTTGTGGTCCAATGCCCATACCTTTATTCACAAGGCGCCACCTCGCATCCCAGTTGTTCATCTTCCTGAAGAGCCTTTTCTTCAATTTGCATCTGCATTGACATTGCAAATTAACCGTGGATTTGCTGCCTTGCGTGCTATCGGTTCTGGAAGAGATTTGAAGACATTCCTCATTGTTATTATTGGCACATGGATTATATCAATTGTGGGGAGCTGGGTCAATTTCCTGACTTTGTTCTACATCGTTTTTGTATCATTGCATACGGTTCCTGTCTTGTATGATAAGTATGAGGACAAGATAGACCCTCTGGCAGAGAAGGCATTGATCGAGTTGAAAAAGCAGTATGCTGTGTTTGACGAAAAGGTGTTGAGTAAGATCCCGAAAGGTCCATTGAAAGGCAAGAAGTTAGCTTAG 759 0.4559 MAEESEHTAAGESLLDKIADKLHGHDSSSSSDSDSDKKESSSIKDKVFRLFGREKPVHSVLGGGKPADVLLWRNKKISASVLAVATAIWIFFELLEYHLLTLVCHILILLLAVLFLWSNAHTFIHKAPPRIPVVHLPEEPFLQFASALTLQINRGFAALRAIGSGRDLKTFLIVIIGTWIISIVGSWVNFLTLFYIVFVSLHTVPVLYDKYEDKIDPLAEKALIELKKQYAVFDEKVLSKIPKGPLKGKKLA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01894 252 Pfam Reticulon 67 222 IPR003388 -
Spst4g01894 252 PANTHER RETICULON 35 242 - -
Spst4g01894 252 ProSiteProfiles Reticulon domain profile. 66 252 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01894 Spst-Chr4 59521248 59523131 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01894 - - gmx:100779788 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01894 4 59521248 59523131 Spst10g00913 10 9930321 9932529 ECH
Spst4g01894 4 59521248 59523131 Spst4g01894 4 59521248 59523131 ECH
Spst1g01170 1 14043695 14048186 Spst4g01894 4 59521248 59523131 PCT