Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01851 ATGGGATCTACCAGTGAAGCATCATCATTTTCCACTCCAACCTCAGGAAGGTCATGGTCCAACCATGTTTTCTTGAGTTTCAGGGGTGACGACACACGCAGAGGGTTCACAGGCCATCTTTTCGATTCACTGGAGAGAAGGGGGATCAAAACTTTCAAGGATGATCATGATCTCGAGAGGGGCAAAGTTATATCAGTGGAACTCATGAAGGCCATTGAAGATTCCATGTTTGCACTCATCATTCTCTCACCAAACTATGCCTCTTCAACATGGTGTTTGGATGAGCTTCAAAAGATTGTAGAGTGCAAGAAAGAAGTTTTTCCAATCTTCCATTGTGTGGATCCCTCTGATGTGAGGCATCAAAGAGGTTGCTTTGCCAAGGCCTTCAGGGAACATGAAGAGAAATTCAGAGAAGACAGAAAGAAGGTGGAAAGATGGAGACTTGCCTTGAGAAAAGTTGCAAGTTACTCTGGCTGGGACTCCAAGGATCAGCATGAGGCAACACTGATTGAAACCATTGTCGGCCATATACAGAAAAAGTTAATTCCTAGACTCCCATGTTTCACAGATAACCTTGTTGGAATTGATTCACGGGTGAAAGAAGTGAATTCACTCATGGGCATGTTGTTAAATGATGTTCGCTTCATAGGAATATGGGGCATGGGAGGCATAGGGATGGACATAGATGAAGTGGTAAATATCTTAGAAAATTGTGGTGATCATCCTAAGATTGGAATCGATATTTTGATTGAAAGATCTTTGCTAACTTTAGATAGGATCACAAATAAGTTGGGGATGCATGATTTGCTACAAGATATGGGTAGGAATATTGTATATCAAGAATCTCCAAATGAGCCAGGGAAACGTAGTAGGTTGTGGTCTCAAAAAGATATTGATTATGTATTGACCAAAAACAAGGGAACTGATGAAATTCAAGGCATTGTTCTGAACTTGGTTCAACCGTATGATTATGAAGCACGCTGGAACACTGAAGCTTTCAACAAGATAAGTCAGCTAAGGTTACTCAAGTTATGTGATATGCAGCTTCTCCGTGGCCTCAACTGCCTTCCTAGTGCACTAAAAGTTGTTCATTGGAGAGGATGTCCTCTCAAAACCCTGCCACTTACTAATCAACTAGATGAAGTTATTGACCTCAAATTGCCTCATAGCAGAATAGAACAGCTTTGGCATGGGACAAAGCTTCTAGAAAAGCTTAAGTTCATCAATTTGAGCTTTTCCAAGAACCTAAAGCAATCCCCAGACTTTGTTGGGGTTCCAAATCTTGAATCACTGGTTCTTGAAGGTTGCACAAGTTTAACTGAGGTTCATCCATCCCTTATACGCCATAAGAAACTTGTTATGTTGAATTTAAAAGACTGCAGGAGGTTCAAAACTCTTCCAAGTAAAATGGAGACGAGTTCCTTGAATGGTTTAAATCTTTCTGGTTGCTCTGAATTTAAACGTCTTCCAGAGTTTGCGGAAAGCATGGAACATTTGTCAGTGCTTTCTTTAGAGGGGACTGCTATAACAAAACTACCCACATCACTGGGATGTCTAGTTGGCCTTGCTCATCTGAATATGAAGAATTGCAAGAATCTTGTTTGCCTTCCAGATACCATTCATAAATTGAAATCCCTCATAGTTCTGAATGTCTCGGGCTGCTCAAAACTTAGTAGCTTGCCAGATGGTTTGAAGGAAATCAAGTGTTTGGAGGAACTTAATGCAAGTGAAACTGCTATTCAAGAGTTACCTTCATCTGTCTTTTATCTGGAAAACCTCAAAGATATCTCAGTTGCTGGGTGCAAAGGGCCAGTATCTAACTCAATAAATAATTTTTTTCTCCCCTTTAAGAGGCTATTTGGGAATCAACAAACTTCCATTGGATTTAGATTACCACCTTCTATAAGATTACCCTCTTTGTGGAAAATAAATTTAAGTTACTGCAATCTATCTGAAGAGTCATTCCCAGATGATTTTTGTCACTTATCTTCGTTGGTGGTTCTAGATCTCACTGGCAACAATTTTGTTAGCTTACCAAGTTGCATTTCCAAACTCTCAAATCTTGAGCGTCTTATCCTAAACTTCTGCAAAAAGCTTCAAAGGTTGCCAGAGCTTCCATCAAACATGCGAGGATTGGATGCAAGCAATTGCACTTCACTAGAAATCTCCAAATTCAATCCGTCCAAGCCATGTAGTCTCTTTTCATCACCTATAAAGTGCCGTTTACCGAGACAACTGAAATGCCTTTTCGAGGAACTCCATCTTCCCAGAGAAAGATTTGACATGCTGATCCCAGGGAGTGAAATTCCACCATGGTTTTCTCCTAATAAAACTGTTTCATTTGCAAAAATATCCATACCTCAAAATTGCCCTATGGATGAATGGGTGGGATTTGCTTTGTGTTTCCTCATAGTAAGTTATGCTGTCCCTCCTGATGTGTGTCATCATGAAGTTGAATGCTACTTGTTTGGACCTAACGGTAAGGAGTTTATCAGCTCCAGGTATTTACCTCCCATGGAGCCATGTGACCCTCACCTTTATATTCTCTATCTGTCCTTTGATGAATTGTGCGGCATAATTTGTAAAGGCGGGGATTGCAGAGAAATTGAATTTGTATTGAAAAGGTATTGTTGTTATTCTCTGGAGATAGTGAGGTGTGGGTCTCGTTTGGTATGTAAGCAAGATGTAGAAGATATTTATGGAAATAGTTTTTAG 2715 0.4018 MGSTSEASSFSTPTSGRSWSNHVFLSFRGDDTRRGFTGHLFDSLERRGIKTFKDDHDLERGKVISVELMKAIEDSMFALIILSPNYASSTWCLDELQKIVECKKEVFPIFHCVDPSDVRHQRGCFAKAFREHEEKFREDRKKVERWRLALRKVASYSGWDSKDQHEATLIETIVGHIQKKLIPRLPCFTDNLVGIDSRVKEVNSLMGMLLNDVRFIGIWGMGGIGMDIDEVVNILENCGDHPKIGIDILIERSLLTLDRITNKLGMHDLLQDMGRNIVYQESPNEPGKRSRLWSQKDIDYVLTKNKGTDEIQGIVLNLVQPYDYEARWNTEAFNKISQLRLLKLCDMQLLRGLNCLPSALKVVHWRGCPLKTLPLTNQLDEVIDLKLPHSRIEQLWHGTKLLEKLKFINLSFSKNLKQSPDFVGVPNLESLVLEGCTSLTEVHPSLIRHKKLVMLNLKDCRRFKTLPSKMETSSLNGLNLSGCSEFKRLPEFAESMEHLSVLSLEGTAITKLPTSLGCLVGLAHLNMKNCKNLVCLPDTIHKLKSLIVLNVSGCSKLSSLPDGLKEIKCLEELNASETAIQELPSSVFYLENLKDISVAGCKGPVSNSINNFFLPFKRLFGNQQTSIGFRLPPSIRLPSLWKINLSYCNLSEESFPDDFCHLSSLVVLDLTGNNFVSLPSCISKLSNLERLILNFCKKLQRLPELPSNMRGLDASNCTSLEISKFNPSKPCSLFSSPIKCRLPRQLKCLFEELHLPRERFDMLIPGSEIPPWFSPNKTVSFAKISIPQNCPMDEWVGFALCFLIVSYAVPPDVCHHEVECYLFGPNGKEFISSRYLPPMEPCDPHLYILYLSFDELCGIICKGGDCREIEFVLKRYCCYSLEIVRCGSRLVCKQDVEDIYGNSF 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01851 904 Gene3D Ribonuclease Inhibitor 496 749 IPR032675 -
Spst4g01851 904 Gene3D Ribonuclease Inhibitor 329 495 IPR032675 -
Spst4g01851 904 SMART LRR_typ_2 567 590 IPR003591 -
Spst4g01851 904 SMART LRR_typ_2 662 685 IPR003591 -
Spst4g01851 904 SMART LRR_typ_2 637 661 IPR003591 -
Spst4g01851 904 SMART LRR_typ_2 496 519 IPR003591 -
Spst4g01851 904 SMART till_3 20 156 IPR000157 GO:0007165
Spst4g01851 904 SUPERFAMILY L domain-like 619 721 - -
Spst4g01851 904 Gene3D - 15 184 IPR035897 -
Spst4g01851 904 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 463 603 IPR044974 GO:0006952
Spst4g01851 904 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 183 - -
Spst4g01851 904 SUPERFAMILY L domain-like 266 619 - -
Spst4g01851 904 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 159 IPR035897 -
Spst4g01851 904 Pfam TIR domain 22 181 IPR000157 GO:0007165
Spst4g01851 904 Pfam C-JID domain 764 897 IPR045344 -
Spst4g01851 904 SUPERFAMILY "Winged helix" DNA-binding domain 225 302 IPR036390 -
Spst4g01851 904 ProSiteProfiles TIR domain profile. 19 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01851 Spst-Chr4 58848707 58853144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01851 226 596 WRKY Transcription Factor Family AT4G12020 39.018 9.17e-66 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01851 - - gmx:100815486 1085.48