Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01830 ATGGCAAAGAAGTCCCAAAGACGCACTGTGCGGTTTGAGAAAGATAAATCGGGCTGCATGTGGGGTTTTATTAGTATGTTTGATTTTCGCCATGGTCACTCCACTAGGAAGATGATTGCAGATAAGAGGCGAACCAGTAAGCATGCTGCTGGGGCCATAAATTCTAAGACCAAGTTCCAATTGAGCAATTTGGATGAAGTTTGTCAAGACAGTTCTGACAGTGGAGAGAGTAGAAGACCAACAGTTGTGACTGCTGCTAATAAGCCTAGCGTGAAGAAACTCATTGAAGAAGAGATGTTCTTTGACCAGAATAAAATGAAGGATACAGATAGTCATCAAATAGAATCAAAGGAATCCAAATTAAGGCGTGAAGTCCTTTTGAAGTTAGATTCCAAAAGAAAAAAGAAATTTTACAAGAAAAACTGTGATAAGGACACCAATGATATAAATTTGGATACAAGGTCAAAATTTGAAATCACAGGTAATCAGCACTCAAGGAAGCAATCCAAAGATAATTTTGATCTTGATAAGATGATTGCAGAATTTTGTCATCTAAAAGATGTTTGTTCCATGATGCATGGCAATGATGTAGAAGTAGAAGTTGATACACAATCAAACCAGAAGCGAGCTATTTCTGAAAATGAAAAAGAAGCAATATGTGAATTTGTGAATCAGATGATATTAAATGGTAAAGATCCAGCTGAAGCCAGAAAATTCCTTTGCTCCCATCAACTTGGGGAAACTCTCCAACTTTTGAGTTCAGATATGGAATTGTTTCTTTCACTGCTACAAAATCCGAATTCACATTTGTTGAAATATGTTCAAGAGTTTAGGAGTTCTCAGGGAACAAATGAAAAAGAATATGGTTGTGTAACTGGTTCCAACTTCTCCGAACAACAAGATCATGGAAACCTGAAACAAAATAGTGATCTAGTCAGCCATAAGAAGCATAACTTTTTCAGAAAAAAGGTGAAGTCTCATTCAAAAAGTTCAACAAATGAAAATGGGAACACTAATTTGTCAAGTATTGTTATTTTGAAACCTGGGCAGATGGGCTTGCAAAATTCTGAAACTGGAAAAAACCTTGCCTCATATCAAGACTCTCATGATGTTGTCAAATACAAGGGTCCTTCTGTGAGAGGTAGTTCACATTTTTCTCTCACAGAGATAAAAAAGAAATTAAAGCATGCAATGGGAAGGGAGAGACATGGAAACCTTGAAGGAATCTCAGAAAGACACCCTACTTTTGAATGTCAAAATAGGAGGCATAGCAACAAAGCCATTGGTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGATCACTTTTTCATTGAAAAAATTGTAAGACCTGCCACTGGTGTATTGAAAGGAGGCAAGATTGGTACAACTAAAGATTTTGAATTGACTGTGGAACATGAAAATGGTAACTATCCAAAACAAAGGGTTTCTAACTTATATATTGAGGCTAAGAAACATCTATGTGAGATTGTAGGTAGTGGAGATGAGAAAATAGACATGTCAAGTAGGCAGATTTCCCGAACCCTTGGGAAAATACTATCTCTTCCTGAGTACAACTTTTCTCCCCTTGGCAGTCCTGGAAGGGATTGGGAGCATCATTTTGTGACTGCACAGACAAGATTTTCCACGTCAGATAAAATTTGGGATGCTAATAAGGATAATTTGTCTCCCAAACAAGGAGCCTTTGTTGGTCATTTAGATCAGGAAGCAGACAATTCAGAGAAGCAGTCAATAATTTGTGATGAAAACTCTATCAATAAAGTACAAGAAATTAAGTCAGACTCAAATTTCACAGACGACCTTTGTCATGTTGATGAAGTAGAAAATTGTTCTCCTGTTAGAGATGAGATAGTAACTGAAGGTGATGTAGAATCTGCAAAAGAGGTGATTGTTTTGGAATCTTCCTCACAACCAGTTGACCTCAGTGCACGAAAGGAGGACCAAAACTATGGTCTCTCAGAAAGTTCTGATTGTACAAGATGCTCTCAATGTTCAAAGCAGGATGTAAAAGAAGAAAACAAACCAGCATCTCCACTGTCATCCCCCCCTTACTCTTCCATCACTAGTGTTACAGATATATCTGGGAGGCCAAGTCCTGTATCTGTTCTTGATACACCGTTCTTAGAAGATGATGTTCAGCCTGTTGAAGTACCAGTACGACCACTGAATTTTGTAGAACAATGCTCTTCACCTTTGAATGAAATCAATAGAGAAAAGTATTGTCTTAAAGAAAATGAATGGATATATGATTACATCAAAGCAATCCTGCAAGCCTCTGGATTGACTATAGATCAATTATCCACGAAATGTGTTTCTTCAGACAAGATCCTAGATCCTTCCTTGTTTGATGAGGTAGAGTTCTTACCAAGCCAGCATTGCCATGATCAGAAGCTCATTTATGACTGTGTCAATACAGTTCTCATGGAGGTTTGTCAGAATTACTTTGGGGTCTCACCTTGTGTGTCATTCATAAATCCTGGCATAAGGTCTTCTCCAAACATGAAGAAGGTTATTCTCAAGGTTTGGGAAGGAGTGTGCTGGCATTTCCTTCCCTTGCCCCCACCACGTACCTTGGACAAAATTATTAAAAAGGACATGGATAAAAATGGGGCATGGATGGACCTTAGACTTGAAGCTGAAACAATTGGTTTTGACATGGAAGAAGCAATTCTTGCAGAACTGATGGAAGATACAATACTAAGCTGTGTAAGCAAAAGTTCACAAGTTGTTTGTTCTCAGCTTCAATTTGAATTTAAGGACAGTGAAAACACCACAAATGTGTAA 2805 0.3786 MAKKSQRRTVRFEKDKSGCMWGFISMFDFRHGHSTRKMIADKRRTSKHAAGAINSKTKFQLSNLDEVCQDSSDSGESRRPTVVTAANKPSVKKLIEEEMFFDQNKMKDTDSHQIESKESKLRREVLLKLDSKRKKKFYKKNCDKDTNDINLDTRSKFEITGNQHSRKQSKDNFDLDKMIAEFCHLKDVCSMMHGNDVEVEVDTQSNQKRAISENEKEAICEFVNQMILNGKDPAEARKFLCSHQLGETLQLLSSDMELFLSLLQNPNSHLLKYVQEFRSSQGTNEKEYGCVTGSNFSEQQDHGNLKQNSDLVSHKKHNFFRKKVKSHSKSSTNENGNTNLSSIVILKPGQMGLQNSETGKNLASYQDSHDVVKYKGPSVRGSSHFSLTEIKKKLKHAMGRERHGNLEGISERHPTFECQNRRHSNKAIGKDNVGMRSPNKDHFFIEKIVRPATGVLKGGKIGTTKDFELTVEHENGNYPKQRVSNLYIEAKKHLCEIVGSGDEKIDMSSRQISRTLGKILSLPEYNFSPLGSPGRDWEHHFVTAQTRFSTSDKIWDANKDNLSPKQGAFVGHLDQEADNSEKQSIICDENSINKVQEIKSDSNFTDDLCHVDEVENCSPVRDEIVTEGDVESAKEVIVLESSSQPVDLSARKEDQNYGLSESSDCTRCSQCSKQDVKEENKPASPLSSPPYSSITSVTDISGRPSPVSVLDTPFLEDDVQPVEVPVRPLNFVEQCSSPLNEINREKYCLKENEWIYDYIKAILQASGLTIDQLSTKCVSSDKILDPSLFDEVEFLPSQHCHDQKLIYDCVNTVLMEVCQNYFGVSPCVSFINPGIRSSPNMKKVILKVWEGVCWHFLPLPPPRTLDKIIKKDMDKNGAWMDLRLEAETIGFDMEEAILAELMEDTILSCVSKSSQVVCSQLQFEFKDSENTTNV 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01830 934 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 909 - -
Spst4g01830 934 MobiDBLite consensus disorder prediction 685 699 - -
Spst4g01830 934 MobiDBLite consensus disorder prediction 641 670 - -
Spst4g01830 934 Pfam Domain of unknown function (DUF4378) 757 904 IPR025486 -
Spst4g01830 934 MobiDBLite consensus disorder prediction 641 699 - -
Spst4g01830 934 Pfam Protein of unknown function (DUF3741) 224 268 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01830 Spst-Chr4 58553029 58556954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01830 1 892 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.516 1.08e-100 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01830 - - gmx:102667950 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01830 4 58553029 58556954 Spst4g01830 4 58553029 58556954 ECH
Spst1g01076 1 13190062 13199646 Spst4g01830 4 58553029 58556954 PCT