Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01825 ATGGTCAACAAGGGGATTCCAAAGCACGAGAAGATACCAAAGAACCTATGCACACAGCTAGCTGTTGCAGTGAGAAGCATTCAGTGGAGCTATGGGATCTTCTGGGCACCTTCCACCACTGAAGAAAGGGTGCTGGAATGGAGGGAAGGGTACTACAATGGAGACATTAAGACAAGAAAGACAGTTCAAGCCATGGAATTGGAAATGAAGCCTGATAAAATAGGCCTGCAGAGGAGTGAGCAACTGAAGGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACACACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAAGACCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCAATCACAATCAAAGTTTGCCTGGAAGAGCACTGGAAACTGGTGACACAATCTGGTTATGCGATGCTCAACACGCAGACAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGACCGTGGTATGTTTTCCCTATCAGAAAGGTGTTATTGAGATAGGCACAACTGAACTGGTTACTGAGGACCCTAATCTCATTCAACATGTCAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGCTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCCACATGTACCAAGGGTGACCACAGGGTGTTGGATACAATGGCTTTGGAAAATCCATGTTCCCTTGAAGAAAAAATCAAATTTGATCATGATCCCATCAATGAATTACAAGATGATAACAATGAAGATTCTCACATGGATTCTCCCGATGGTTGTGAGCACCATTACCCTATGAAATCCATGATTGAGGGTATCAATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTAGTCATTGGTGCTCCTGATTCCCTGAGTTCCTGTGATTGTATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTAAACTTATGGAACTTCAAGATTGCTATAAACCAAAGAGAAGCTTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATTAGAACCCTTTGTTCTATTTTGGGAAATTCATCAACTTTTAAACCAAACCCTTATACCAGCAAATCAAATTGCAAATCTAGTTTTGCAAAATGGAGGAAAGGGAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTTTTCTCTCAAGTCACAGAAAGAGAATAGCAGAATGGAATGGACTAGTAAATTGGAAAATGCTGATAATGGTTTCATGGGGAAAACATTCTCTGATAAGAAAAGAGAAACTAAAAACTTTCAGGCTGTCAAATCTTTGGCTCCATCTTTTATAAGTGAGGAGGAGAAGATTTCAATTCTTGGGGACACAATCAAGTACTTGAAAAAGCTTGAGACTAGAGTGGAAGAGTTAGAATCTTACATGGAAGTTGCAGATCCTGAAGCAAGAACCAGAAGAAAATGCCCTGATGTTCTAGAACAGATGTCAGATAACTACGGAACCAGAAAAATTTGCATGGGAATGAAACCTTGGATGAGCAAGAGAAAGGCAAGTGTTATTGATGAGATAGACACAGAGCTAGAAAGAATTGTTTCTGAAGAAGCAAAGGCTTTGGATGTGAAAGTCAATGTGAAGGAGCAAGAGGTTCTTATTGAGATGAAATGTCCTTACAGGGAATACATACTCTATGATATCATGGATACCATTAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGTGTTCTCTCATTGACACTTAAATCTAAGTTTCGTGGAGCAGCAACAGCACCAATGAGGATGATCAAAGAAGCACTATGGAAAGCATCTGGAAATATTTGA 1935 0.4041 MVNKGIPKHEKIPKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKPDKIGLQRSEQLKELYKFLLAGEADPHTKRPSAALAPEDLSDLEWYYLVCMSFVFNHNQSLPGRALETGDTIWLCDAQHADSKIFSRSLLAKTVVCFPYQKGVIEIGTTELVTEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDHRVLDTMALENPCSLEEKIKFDHDPINELQDDNNEDSHMDSPDGCEHHYPMKSMIEGINGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTKLMELQDCYKPKRSFLDAGADEDLCYIRTLCSILGNSSTFKPNPYTSKSNCKSSFAKWRKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYFSLKSQKENSRMEWTSKLENADNGFMGKTFSDKKRETKNFQAVKSLAPSFISEEEKISILGDTIKYLKKLETRVEELESYMEVADPEARTRRKCPDVLEQMSDNYGTRKICMGMKPWMSKRKASVIDEIDTELERIVSEEAKALDVKVNVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPMRMIKEALWKASGNI 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01825 644 PANTHER TRANSCRIPTION FACTOR TT8 9 640 - -
Spst4g01825 644 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 196 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01825 Spst-Chr4 58434629 58439370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01825 8 641 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 37.785 1.15e-117 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01825 - - gmx:100783746 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01825 4 58434629 58439370 Spst4g01825 4 58434629 58439370 ECH