Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01817 ATGGGTATTCAGTGTTCCAGACTCATGCCATGCTGTGTGGATTCACAAGTTAAGGCATCTGTTGTTGAAACTCCACATGCTGAAATTGAGGATAGTAGTGAGGTCAGTAATTGGCCTACATTTCGTGAATTTACACTTGAGCAACTTAAGAATGCAACATCTGGTTTTGCTGTTGAAAACATTGTATCCGAACATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGAAAGCTGGAGAATCAAACGAGAATCGCCGTTAAGCGGTTTAACAGGAATGCTTGGCCTGATGCTCGGCAGTTTTTGGTAAATTCGCCTGTCCCAGAGGAAGCAAGATCAGTTGGTCAGCTTCGTAACCAAAGATTGGCAAATTTGCTTGGTTGTTGCTGTGAAGGAGATGAGAGGTTGCTTGTTGCAGAATATATGCCCAATGAAACACTGGCAAAACACCTTTTCCATTATTTGGTTGACTATAACCTACTAGGGGAAACACAGCCTATGAAATGGGCAATGCGACTAAGAGTTGTTCTACATCTTGCACAAGCTCTAGAGTACTGCACAAGCAAAGGGCGTGCTCTTTATCATGACCTTAATGCATATAGAGTTCTTTTTGACGAGGATGGTAATCCTAGGCTTTCGAGTTTCGGCCTTATGAAAAACAGCAGGGATGGGAAAAGCTATAGCACAAATTTGGCATTTACCCCTCCAGAGTATCTCAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGCTTTGGCACCCTTCTACTTGACCTTCTCAGTGGGAAGCATATCCCCCCAAGTCATGCCCTCGATGTGATTCGCGGAAGAAATCTTCAGATGTTAACAGATTCTTGTTTGGAAGGACAATTTTCCGATGATGATGGAACTGAGTTGGTACGCTTGGCATCTCGATGTTTACAATATGAACCTAGAGAACGGCCTAATCCAAAATCATTGGTAGCTGCTTTGTCTCCTCTTCAGAAGGAAACAGAGGTTCTTTCACATGTCTTGATGGGCATCCAGCACAGTACTACTTTTGCCTTATTATCTCCACTTGGTGAAGCATGCTCAAGAAAGGACTTGACTGCCATACATGAAGTTCTGGAAAATATTGGCTATAAAGATGATGAAGGAGTGGCAAATGAGTTGTCATTTCAGATGTGGACTGATCAGATGCAGGAAACATTAAATTGCAAGAAAAAGGGGGATGTTGCTTTCCGGCAGAAAGATTTTAGAATGGCAATTGAGTGCTACACGCAGTTCATTGATGCTGGAACAATGGTTTCTCCAACAGTCTACGCACGGCGTAGTTTGTCTTATCTCATCAGTGACATGCCTCAGGAAGCGCTGAACGATGCAATGCAGGCGCAAGTGGTTTCACCCGTATGGCACATAGCATCTTATCTTCAATCTGTTGCTCTCACTGGACTTGGAATGGAGAATGAAGCCCAAGCAGCACTTAAAGATGCCACAACACTGGAATCCAAGCGGAATGCAACTACCAGGCAAAAATGA 1518 0.4328 MGIQCSRLMPCCVDSQVKASVVETPHAEIEDSSEVSNWPTFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQTRIAVKRFNRNAWPDARQFLVNSPVPEEARSVGQLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHYLVDYNLLGETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALSPLQKETEVLSHVLMGIQHSTTFALLSPLGEACSRKDLTAIHEVLENIGYKDDEGVANELSFQMWTDQMQETLNCKKKGDVAFRQKDFRMAIECYTQFIDAGTMVSPTVYARRSLSYLISDMPQEALNDAMQAQVVSPVWHIASYLQSVALTGLGMENEAQAALKDATTLESKRNATTRQK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01817 505 Gene3D Transferase(Phosphotransferase) domain 1 142 342 - -
Spst4g01817 505 SUPERFAMILY TPR-like 397 496 IPR011990 GO:0005515
Spst4g01817 505 Gene3D Tetratricopeptide repeat domain 394 505 IPR011990 GO:0005515
Spst4g01817 505 Coils Coil 503 505 - -
Spst4g01817 505 Gene3D Phosphorylase Kinase; domain 1 30 140 - -
Spst4g01817 505 FunFam probable serine/threonine-protein kinase At5g41260 142 341 - -
Spst4g01817 505 FunFam probable serine/threonine-protein kinase At4g35230 31 140 - -
Spst4g01817 505 SUPERFAMILY Protein kinase-like (PK-like) 43 331 IPR011009 -
Spst4g01817 505 FunFam probable serine/threonine-protein kinase At4g35230 394 503 - -
Spst4g01817 505 Pfam Protein tyrosine and serine/threonine kinase 72 323 IPR001245 GO:0004672|GO:0006468
Spst4g01817 505 ProSiteProfiles Protein kinase domain profile. 59 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01817 505 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 499 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01817 Spst-Chr4 58369479 58376037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01817 30 327 Glycoside Hydrolase AT3G07070 33.025 1.20e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Spst4g01817 PK_Tyr_Ser-Thr 1.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01817 K14500 - gmx:100781311 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01817 4 58369479 58376037 Spst4g01817 4 58369479 58376037 ECH