Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01808 ATGGGGAGCATTGGTGGTGTTAAGGGTGGTTCCATGAGTGCTGGTAGTTCAAATGGAGAGCGGAAAACCAAAGGTGTGGTTGGTCAAGGTAGTACTGAAGAAGGCTCAACATTTTGGCAGAAATTGAGGTTTTTTCTAGGTTGCATGGTTTTCAGTTCAAAAGGGGAAGGATCCTCCAGTGACAAAAACAAACAAGGAAGAAATGTCAGAAAAGGTGGTGTTAAGAAAAAAAGGTCAAAAAGATCCTCATCCCCCAACGAAAGCCAGGAATTTATTGCAACTTCTTCCCATCTAAGAAGGTTCACTTTTCACGATATTCAGCTGGCAACAAAGAACTTTGATTCTAGGAATTTTCTTGGTAGGGGAGGTTTTGGAACTGTGTTCAAAGGTTGGGTTGATGATGCAACTGGAACAAGTATTCCAGTAGCAGTGAAGACTCTCAACCCGAATGGACTTCAAGGTCATAAACAATGGCTTGCTGAAATTAAATATCTGGGTGAACTTCATCATCCTAATCTAGTAAGATTGGTGGGCTATTGCATTGAAGATGATAAAAGGGTTCTCGCATACGAGTTCATGAGTCGAGGAAGCCTAGAGAAGTATCTGTTCCAAAGAGGACATTGGACTATGCAACTCCCATGGTCTATGAGGATGAAAATTGCAATGGATGCTGCTAATGGTTTGGCATTTTTACACCAGGAAGCTTCACCAGCAGTAATATTCAGAGATTTCAAAACATCCAACATACTATTGGATAAGGACTTCAACGCAAAACTTTCAGACTTTGGGCTTGCAAAAGATGCACCGGTGGGACATAAAAAACATGTGTCCACTGAGGTAATGGGAACCGAAGGCTATATAGCTCCTGAGTATGTGATGACAGGACACCTTACTTCCAAGAGTGATGTTTATAGCTTTGGGATGGTTCTCCTTGAAATGTTGACAGGAAGAAGAGCAGTGGATCAAGTGAGGCCTGCAAAAGAGAAAAACTTGGTAGATTGGTTGCGGCCTCGTATTAGGAACAAAGAAAATTTTCGTTATGTAATGGATCCTAGATTTAGAGGCCAATATCCAATGAGACAAGCCTATAGGGCAATGAAGTTGGCCATTCACTGTCTTCGCCATGATCCAAAAGCAAGACCCCTTATGAGTGAAGTGGTTTGTGAGTTGCAGTCTTTGTTGGCTGATGATGATGTTGACATGTTTTCTGCTCCCTCAACCTCGGTTTCCCCACCTTCCATCCCCACAACCTCACTTGGAAGAATTCATGTAGGTCCCTCCAACCATGGTGGTGCTAACAAGTATGGCCTGAGAAGTCCAGCACCAAATATTCCATTGCGTTTTCAAGCCTCACCACTGGGCCAAAACAACCCTCTAACCCTACTACAATCCTAG 1395 0.4301 MGSIGGVKGGSMSAGSSNGERKTKGVVGQGSTEEGSTFWQKLRFFLGCMVFSSKGEGSSSDKNKQGRNVRKGGVKKKRSKRSSSPNESQEFIATSSHLRRFTFHDIQLATKNFDSRNFLGRGGFGTVFKGWVDDATGTSIPVAVKTLNPNGLQGHKQWLAEIKYLGELHHPNLVRLVGYCIEDDKRVLAYEFMSRGSLEKYLFQRGHWTMQLPWSMRMKIAMDAANGLAFLHQEASPAVIFRDFKTSNILLDKDFNAKLSDFGLAKDAPVGHKKHVSTEVMGTEGYIAPEYVMTGHLTSKSDVYSFGMVLLEMLTGRRAVDQVRPAKEKNLVDWLRPRIRNKENFRYVMDPRFRGQYPMRQAYRAMKLAIHCLRHDPKARPLMSEVVCELQSLLADDDVDMFSAPSTSVSPPSIPTTSLGRIHVGPSNHGGANKYGLRSPAPNIPLRFQASPLGQNNPLTLLQS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01808 464 ProSiteProfiles Protein kinase domain profile. 113 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01808 464 PANTHER OS01G0588500 PROTEIN-RELATED 76 392 - -
Spst4g01808 464 CDD STKc_IRAK 119 393 - -
Spst4g01808 464 Pfam Protein tyrosine and serine/threonine kinase 117 390 IPR001245 GO:0004672|GO:0006468
Spst4g01808 464 MobiDBLite consensus disorder prediction 1 34 - -
Spst4g01808 464 FunFam Serine/threonine-protein kinase BIK1 80 192 - -
Spst4g01808 464 SUPERFAMILY Protein kinase-like (PK-like) 86 390 IPR011009 -
Spst4g01808 464 MobiDBLite consensus disorder prediction 54 91 - -
Spst4g01808 464 MobiDBLite consensus disorder prediction 10 34 - -
Spst4g01808 464 Gene3D Transferase(Phosphotransferase) domain 1 193 406 - -
Spst4g01808 464 FunFam Serine/threonine-protein kinase PBS1 193 407 - -
Spst4g01808 464 Gene3D Phosphorylase Kinase; domain 1 72 192 - -
Spst4g01808 464 ProSitePatterns Protein kinases ATP-binding region signature. 119 145 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01808 Spst-Chr4 58217928 58220611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01808 46 412 Glycoside Hydrolase AT3G07070 43.467 6.28e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst4g01808 PK_Tyr_Ser-Thr 9.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01808 - - vum:124826044 637.491