Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01807 ATGAGGATGAAAATTGCAATTTCTATTGCTAATGGCCTTGCATTTTTACATGAAGAAGCTTCAAAACCATTAATACTCCATGATTTTAAGACATCTAAGGTTCTATTGGATAGGGATGGTAACGCAAAACTTTGGGATTTTGTTCTTGTGAGAGAAATTCATGTGACATCTAAAAATATTGTTGAGGCAGGACACATTACTTCCGAGAGCAATGTTTATACCTTTGGGATTGTTCTACTTGAAATGCTAACAGGAAGAAGAGCTTTGGATCAAGGAATGGCAATAGAAGAACAAAACTTGATAGAATGGTTAAGACCTCATCTTAAAAACAAAGCAAGTTTTCATTATTTAATGGATCCTAGACTTGAAGGTCAATACCCAACAAAATGTGCTCATAGGACAATGAGATTAGCTACTCATTGTCTTCGCCAAGACCCAAAAGCAAGACCTGTTATGAGTGAAGTAGTTTATAAATTGAAGTATTTGCATGATGACATGGTTCATGAGCTTGGTCCTTCCAACCATTGTAGTGTTAATAAGTATGGTCTTGGAATAGGTTCATCACCAAATGTTTTAAGGTGCTTTCAAGCCTCGCCACAGTGTCAATATTATCCTCTACCTCTACCACCAAATCCTAATGTTGGATCTTCATACAAATTCTAA 663 0.3605 MRMKIAISIANGLAFLHEEASKPLILHDFKTSKVLLDRDGNAKLWDFVLVREIHVTSKNIVEAGHITSESNVYTFGIVLLEMLTGRRALDQGMAIEEQNLIEWLRPHLKNKASFHYLMDPRLEGQYPTKCAHRTMRLATHCLRQDPKARPVMSEVVYKLKYLHDDMVHELGPSNHCSVNKYGLGIGSSPNVLRCFQASPQCQYYPLPLPPNPNVGSSYKF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01807 220 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01807 220 Gene3D Transferase(Phosphotransferase) domain 1 1 175 - -
Spst4g01807 220 Pfam Protein kinase domain 4 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01807 220 PANTHER OS01G0588500 PROTEIN-RELATED 1 162 - -
Spst4g01807 220 SUPERFAMILY Protein kinase-like (PK-like) 2 165 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01807 Spst-Chr4 58207202 58208540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01807 2 162 Glycoside Hydrolase AT3G07070 38.983 2.02e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst4g01807 Pkinase 2.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01807 - - var:108344548 312.383