Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01796 ATGGATATACCTTTTAGGTTACCGCAGTCAAATATGGTATTGGATGGTTTGGATTCTTGCGTTGTATTTGGAGGCAGAGGTTTTGGTTGTGCTTTTCACGGCAACTTGAGGACTAGTTCAAAGGTTCGTTTTAGTGGAATGAACAAGATAGGTAGTAGGAGTGGTTTGAGGGTAGACTGTTTAGGAGAGTTGAAAGTTTCGAGTGGGAAGAGAAGTTTGTGTTGGAAGAGAAATAAACTTTTTAGGGGGAATAGGAAAATTTGGACAAAGTGTCAAGGTAACGATTCTTTAGCATATGTCAATGGCAATGGACGGAATGTTGATAGGGTGGAAGGTGCAGATGAGGACTCTGGTTCCAATGCTGAATCGAGTGAACCTTTTGGAGAAGCAGGGCAAGGAGAGAGGAAAGAAGATGGGGGTGAAGTAGTAGAAGTGCAAAATGTGGATGAATTGAAAGAACTGTTGCAAAAGGCCAAGAAAGAATTAGAAGCTGCTCGAGAAAAAAACATTGTATACGAGGAAAAAGTTAAGAAGATATCAGAGACTGCGATTTATTTGCAAGATGAAGCAGCAAGTTCTTGGAACAATGTTACTTCTACCCTTGATATCATCCAAGATATTGTGAGTCAAGAATTTGTTGCCAAAGAAGCTGTTCAGAAGACAACTATGGCTCTTTCTCTGGCTGAGGCACGGCTTCAAGTAACCTTAGACTCTTTGGAGGTTACAAAAGCAGCTTACGACTCCCCACGAGGTTCTAACAACAGTAATGGTGATAAAGAAATAATGCAAGAGGAGAAAGAACTTTTGGTTGCTCAGGAAGATATCAAGGAATGCCAGAAAAATTTAGCAAATTGCGAGAATGAGCTGAGATACTTGCAATGCAGGAAGGAGGAGTTGCAGAATGAAGTGCACAAATTGCATGAAATTGCAGAACAGGCGCAGGTGAAAGCAGCAAAAGCAGAAGAAGATGTCGCAAACATAATGCTGTCAGCAGAAAAAGCTGTTGCTGCGGAACTTGATGCTGCACAACACGTGAATGATGCAGAGATTGCATTGCAGAAAGCAGACAAATCTGCCTCTAGTTTTAATGCTGATACCAATGACACTTTACAAGTACAAGAGGTTGTGGCTATTCCTGAGGAGGAGGAAGTGGTTCAAGGTTTTTCTGGTGATGACGTTGATAAAAGAGAGGCTGATTTTTCAATTGATGATGAGCCTTTGCTTACTATGCAATCACCAGAAGCACAATCAGATAACAATAGGCAAAGTTTCGAAGACATGGCACAGTCTGATTATCTTAGTGATCATGAGAACAGACAGTTAAGCTTAGATTTTTCTAAAGAAGCTGAAGATGAAATAGAGAAGTCAAAGAATGTAGTTCAAACAAAAAAGCAGGAAACACAGAAAGATTTGACTAGAGATAATTCACCGGTTGCTCCCAAGACATTATTGAAGAAATCTTCCCGATTTTTCCCTGCATCATTCTTCTCTTTTACTGCAGATGAGACTGATTACACACCAGCATCAGTTTTCCATGGTCTTGTGGAGTCTGCACAGAAGCAACTGCCCAAGTTGATTGTTGGGTTATTGTTAATTGGAACAGGGCTAGTGTTCTATACCAATAGAACAGAGAGGAGTGCTCAGCTGCTTCAGCAGTCAGAAGTCATTGCAACCACTGTTGAAGAAGTTTCTTCAACGCCAAAGCCTCTGGTTAGGCGACTTCAGGAGCTTCCCAGCAGAATTAAGAAAATTGTTGCATCATTACCGAATCAAGAGGTGGATGAGGAGGAAGCCTCCCTCTTCGACATGCTTTGGTTACTCCTTGCAAGTGTTGTATTTGTACCAATATTTCAAAAGATTCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCGGGTATCTTGATTGGGCCTTATGGTCTCTCCATAATTCGTCATGTACATGGGACAAAAGCAATAGCTGAGTTTGGAGTTGTTTTCCTGTTATTCAATATTGGGCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTTTTGGTTACTGCTGTAGTTGTCGGCTTTGTGGCTCATTATATTTGTGGTCAAGCTGGCCCTGCTGCTATTGTCATTGGGAATGGTCTAGCATTATCATCAACTGCTGTTGTTTTGCAAGTGTTACAGGAGAGAGGTGAGAGCACATCGCGGCATGGAAGGGCTACATTCTCTGTTTTGCTTTTTCAGATAGTAGAGAGAAAAGGGTTTGCAGAATGGATTACTGGAAGTGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGTCTGGCTGCTGTAAAGGCAGTGGTTGCCATTGCAGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCAATATATAAGCAGATTGCAGAGAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACTAGCCTTCTCACAGCCAGGCCGAGGTTTGATAGTGTTCTTGAAGTTAATCTTGTGTCCATTGACGTGATGACTTTTTTGGCTGGGCTTTCAATGGCATTAGGGGCATTTTTGGCCGGTTTACTACTGGCAGAAACAGAGTTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTACTGGGTCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTTCCAATTGTTGCTGGGACCTTGGGACTTTTGATATTTGGCAAGACTTTGTTGGTTTCTTTAATTGGTAGAATATTTGGTATTTCTCTCATTTCTGCCGTTAGAGTTGGTCTTCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATCTCTTCCCAGTTATCTTCCTTACTGTTTCTTGTTGTGGGAATTTCAATGGCCCTCACTCCTTGGCTAGCTGCAGGAGGCCAGCTCCTGGCTTCCCGTTTTGAGCTGCATGATGTTCGGAGTTTATTACCTGTAGAAAGTGAGACTGATGATCTGCGAAATCATATCATTATTTGTGGATTCGGGCGAGTTGGGCAAATCATTGCACAACTCCTTTCTGAGCAACTTATTCCTTTTGTTGCACTAGACGTGAGAAGTGATAGAGTGGCAATGGGACGCTCACTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACATAAGGTTGGGGCTGAAAGAGCAAGTGCCGCTGCAATAACTCTAGATTCCCCTGGAGCGAATTATAGAACAGTTTGGGCTCTTAGCAAGCACTTCCCAAACGTGAAAACTTTTGTTCGTGCTCATGATGTTGATCATGGATTGAATTTGGAAAAGGCTGGAGCTACCGCGGTTGTACCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCCGTGCTTGCTCAGGCTAAACTTCCTACATCAGAGATTGCAGCAACCATAAATGAATTCAGAATCCGTCATCTGGCTGAGCTCACTGAACTATCTGAAACAAATGGAAATTCTTTTGGATATGGATACAATAAAATTACATCCAAACCCAAATCTCAATCCCCAGATTTACCAGATGATACTCAGATCTCTGAAGGAAAACTGAAGTTTGTATCGATTAAAATACTCGAAAAATCAAGAGCTGAGAGACCTACACCGCTTGTAGCCCGGAACTTGAGTAAGAGCATGGGTTCGATAGATGACCAGGGCAATTTACGCCCGCCAATACCACTAAAAAGTGACAACATTGTCAATCCACGAGGGAAGATGGGCTTTAACACGGAAAGGTGA 3828 0.425 MDIPFRLPQSNMVLDGLDSCVVFGGRGFGCAFHGNLRTSSKVRFSGMNKIGSRSGLRVDCLGELKVSSGKRSLCWKRNKLFRGNRKIWTKCQGNDSLAYVNGNGRNVDRVEGADEDSGSNAESSEPFGEAGQGERKEDGGEVVEVQNVDELKELLQKAKKELEAAREKNIVYEEKVKKISETAIYLQDEAASSWNNVTSTLDIIQDIVSQEFVAKEAVQKTTMALSLAEARLQVTLDSLEVTKAAYDSPRGSNNSNGDKEIMQEEKELLVAQEDIKECQKNLANCENELRYLQCRKEELQNEVHKLHEIAEQAQVKAAKAEEDVANIMLSAEKAVAAELDAAQHVNDAEIALQKADKSASSFNADTNDTLQVQEVVAIPEEEEVVQGFSGDDVDKREADFSIDDEPLLTMQSPEAQSDNNRQSFEDMAQSDYLSDHENRQLSLDFSKEAEDEIEKSKNVVQTKKQETQKDLTRDNSPVAPKTLLKKSSRFFPASFFSFTADETDYTPASVFHGLVESAQKQLPKLIVGLLLIGTGLVFYTNRTERSAQLLQQSEVIATTVEEVSSTPKPLVRRLQELPSRIKKIVASLPNQEVDEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGFVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQIVERKGFAEWITGSVGFQAIAEALGLAAVKAVVAIAAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARPRFDSVLEVNLVSIDVMTFLAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPIVAGTLGLLIFGKTLLVSLIGRIFGISLISAVRVGLLLAPGGEFAFVAFGEAVNQGIISSQLSSLLFLVVGISMALTPWLAAGGQLLASRFELHDVRSLLPVESETDDLRNHIIICGFGRVGQIIAQLLSEQLIPFVALDVRSDRVAMGRSLDLPVYFGDAGSREVLHKVGAERASAAAITLDSPGANYRTVWALSKHFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRIRHLAELTELSETNGNSFGYGYNKITSKPKSQSPDLPDDTQISEGKLKFVSIKILEKSRAERPTPLVARNLSKSMGSIDDQGNLRPPIPLKSDNIVNPRGKMGFNTER 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01796 1275 Coils Coil 145 182 - -
Spst4g01796 1275 Gene3D - 596 993 IPR038770 -
Spst4g01796 1275 ProSiteProfiles RCK N-terminal domain profile. 1020 1142 IPR003148 GO:0006813
Spst4g01796 1275 Pfam Sodium/hydrogen exchanger family 605 988 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst4g01796 1275 MobiDBLite consensus disorder prediction 403 422 - -
Spst4g01796 1275 FunFam K(+) efflux antiporter 2 chloroplastic 1016 1180 - -
Spst4g01796 1275 Pfam TrkA-N domain 1021 1134 IPR003148 GO:0006813
Spst4g01796 1275 Coils Coil 446 466 - -
Spst4g01796 1275 MobiDBLite consensus disorder prediction 108 140 - -
Spst4g01796 1275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1017 1158 IPR036291 -
Spst4g01796 1275 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 183 1201 - -
Spst4g01796 1275 MobiDBLite consensus disorder prediction 452 478 - -
Spst4g01796 1275 MobiDBLite consensus disorder prediction 452 471 - -
Spst4g01796 1275 Gene3D - 1017 1180 - -
Spst4g01796 1275 MobiDBLite consensus disorder prediction 1232 1275 - -
Spst4g01796 1275 Coils Coil 261 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01796 Spst-Chr4 58083723 58103192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01796 91 1214 Inorganic Solute Cotransporters AT4G00630 66.550 0.0 1330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01796 K03455 - gmx:100791174 1859.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01796 4 58083723 58103192 Spst4g01796 4 58083723 58103192 ECH