Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01777 ATGCCTCGTGGAACGCTTGAAGTTATTCTGATCAGCGCCAAAGGCCTTGATGACAATGATTTTCTCTCCAGCATAGATCCTTATGTGATTCTCACATACAGGGCACAGGAGCACAAGAGCACTGTGCAAAAAGATGCTGGATCCAACCCACAATGGAATGAGAGCTTTCTTTTCACTGTCTCTGACAGTGCTTCTGAACTTCATCTAAAGATCATGGACAAAGACAACTTTAGTCAGGATGATTTTCTTGGCGAGGCAACCATTTATTTAGATCCAGTGCTTGAAGCGGGTAGCCTTCCAGAAACTGCTTACAAGGTTGTGAAGGACGAAGAATATTGTGGAGAGATTAAGGTGGCTCTCACTTTCACTGCTGAGAGAAACCAGGAGCAGAGTTACGATGCAGAGAATGAGAACTATGGTGGATGGAGACAATCAAGTGGGGAATTTTAA 450 0.44 MPRGTLEVILISAKGLDDNDFLSSIDPYVILTYRAQEHKSTVQKDAGSNPQWNESFLFTVSDSASELHLKIMDKDNFSQDDFLGEATIYLDPVLEAGSLPETAYKVVKDEEYCGEIKVALTFTAERNQEQSYDAENENYGGWRQSSGEF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01777 149 MobiDBLite consensus disorder prediction 127 149 - -
Spst4g01777 149 PANTHER C2 DOMAIN-CONTAINING 1 136 - -
Spst4g01777 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Spst4g01777 149 SMART C2_3c 5 102 IPR000008 -
Spst4g01777 149 CDD C2_putative_Elicitor-responsive_gene 4 123 - -
Spst4g01777 149 Gene3D C2 domain 2 124 IPR035892 -
Spst4g01777 149 Pfam C2 domain 4 99 IPR000008 -
Spst4g01777 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01777 Spst-Chr4 57849381 57850823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01777 4 119 C2H2 Transcription Factor Family AT4G21160 33.621 2.02e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01777 - - gmx:100500006 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01777 4 57849381 57850823 Spst4g01777 4 57849381 57850823 ECH