Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01729 ATGGCCTCTTCTTCACCGACCTTCCTCGCCATCCTCCTCCTTCTCCTCTTCTTCCACTTCCGCCCTTCCTCGCCGCTCCCCCTCTCCGTGGAGAGCCCCGACGAGGACGTCATAGTTTCGTGGCCGAAGGGGACGTTCACGGCGGGGTTTAGGCGCGTGGGGGAGAACGCGTACTGCTTCGGCGTGTGGTTCTCGCAGGCGGAGAAGAGCGTGGTGTGGATGGCCAACCGCGACCTTCCCGTGAACGGGAAACGCTCCTCGCTCTCCCTCCTCAAGAACGGCAACCTCGTGTTGTCTGACGCCGGCCAGATTGACGTTTGGGCCACCAACACTCTGTCGCCGGAGCCGCTGGAACTGCATTTGCACGATACAGGGAACCTCGTGCTCCGGGAACAGAGCAATAGAAGCTCCGTTTTGTGGCAGAGCTTTAATTTTCCTACTGATACACTCCTCCCCGGCCAGATTCTCACCAGGTTCACGAAGCTTGTTTCGTCGAGAAGTGCGGGCAACCATTCCTCTGGGTTTTACCAGCTCTTCTTCGACAACGACAACGTTTTCCGTCTTCTGTACGAGGGTCCTCAAGTTTCAAGCGTTTATTGGCCAGATCCTTGGCTGGTTAGCAACAACGTTGGGAGTGGTAACGGGAGATCCACGTACAATAGTAGCAAAGTTGCAGTTCTAGATGACTTTGGCAGATTCAGTGCTTCTGATCATTTCGATTTTAAGACAATTGACTATGGGCTACTCCTTCAACGAAGGTTGACCCTTGACTATGATGGCAACGTTCGTATCTATAGCAGGAAAAATGGTCAAGAAGATTGGTCTATAACAGGTCAATTTAAATCACAACCTTGCTTCATTCATGGTATTTGTGGACCTTACAGTATATGCAGTTACGAACAAGCAATTGGTAGAAAGTGTACGTGTCTTGAAGGGTTTAGTTGGATTGATAGTCAAGATTGGTCTTTAGGTTGCAAACCAAATTTCCAACCTACTTGTGATAACAAGACAGAGTATCACTTCGTACCCTTGGATGAAGTGGATTTTTATGGATATGACTATGGATCTTCCTTTTCAAATTACACATATAAACAATGTGAGAAGTTGTGCTTGGGATTGTGCGAGTGCATGGGCTTTCAGTACACCTTTGCCCCAGAAAATGGTCTCTTTTGGTGTTACCCAAAGACGCAGTTGCTAAATGGACACCGTTCACCTGGTTTCACAGGACAAATTTTCCTGCGTCGGCCAAAAAATAGTGTTCAAGAGAACCACTTGCAAAACAATGATGGCTTGGTTTGTTCGAGAAATGCAGAAAAACTACTAGAAAGACCATATGTGAAAGGCCAGAAAAATGGATCCGTTAAGTTCATGCTTTGGTTTGCAGTTGGCTTGGGAGGGTTTGAGGTCATGTGCATCTTTATGGTGTGGTGTTTCTTGTTTAGGAGTAGCAACCATTTGGTTAGTGCAGACCGACAAGGGTATGTTCTTGCAGCAGCTACAGGGTTCAGAAGGTATACGTATTCTGAACTGAAACAAGCCACAAAGGGTTTCAGGGAAGAGATTGGAAGGGGTGCTGGGGGGACAGTGTACAAGGGTGTGTTATCGGATAACCGAGTTGCAGCAATAAAAAAGCTACACGAATTTGCAGACCAAGGAGAGAGTGAGTTCCTCACTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTAATTGGCATGTGGGGGTATTGTGTAGAAGGAAAACACAGGATGCTGGTTTATGAGTACATGGAAAATGGCTCTTTGGCTAATAATCTTCCATCAAATTCACTTGATTGGAGCAAGAGGTATAACATTGCAGTGGGAATGGCAAAGGGTTTGGCCTATTTACATGAAGAGTGCTTGGAGTGGATCTTGCACTGTGATATCAAGCCTCAAAACATACTTCTTGACTCTGATTACCAACCCAAGGTGGCTGATTTTGGCTTGTCCAAGCCATTGAACAGAAACAACCTAAACAACTCAAGCTTCTCTAGAATAAGAGGCACAAGGGGTTACATGGCACCAGAATGGGTTTTCAACTTGCAAATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGGAGGAGTCCAATGATAGGTGTCCAAGTCACAGAACTAGGGGCAGAGTCCCATAATGAGAGGTTGGCTACATGGGTGAGGGAGAAAAGGAGGAAAGCACCAGCAGGGGCATGTTGGGTGGAACAAATTGTTGACCCCACTTTGGGATCAGATTATGACATGAAGCAGATGGAGATATTGGCAACTGTGGCTTTGGAATGCGTAGAGGAAGAGAAAGATGCGAGACCTAGCATGAGTCAAGTTGTGGAGAGACTCCAAAGTCATGAACATGATTCTTAA 2406 0.4672 MASSSPTFLAILLLLLFFHFRPSSPLPLSVESPDEDVIVSWPKGTFTAGFRRVGENAYCFGVWFSQAEKSVVWMANRDLPVNGKRSSLSLLKNGNLVLSDAGQIDVWATNTLSPEPLELHLHDTGNLVLREQSNRSSVLWQSFNFPTDTLLPGQILTRFTKLVSSRSAGNHSSGFYQLFFDNDNVFRLLYEGPQVSSVYWPDPWLVSNNVGSGNGRSTYNSSKVAVLDDFGRFSASDHFDFKTIDYGLLLQRRLTLDYDGNVRIYSRKNGQEDWSITGQFKSQPCFIHGICGPYSICSYEQAIGRKCTCLEGFSWIDSQDWSLGCKPNFQPTCDNKTEYHFVPLDEVDFYGYDYGSSFSNYTYKQCEKLCLGLCECMGFQYTFAPENGLFWCYPKTQLLNGHRSPGFTGQIFLRRPKNSVQENHLQNNDGLVCSRNAEKLLERPYVKGQKNGSVKFMLWFAVGLGGFEVMCIFMVWCFLFRSSNHLVSADRQGYVLAAATGFRRYTYSELKQATKGFREEIGRGAGGTVYKGVLSDNRVAAIKKLHEFADQGESEFLTEVSIIGRLNHMNLIGMWGYCVEGKHRMLVYEYMENGSLANNLPSNSLDWSKRYNIAVGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKPLNRNNLNNSSFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTELGAESHNERLATWVREKRRKAPAGACWVEQIVDPTLGSDYDMKQMEILATVALECVEEEKDARPSMSQVVERLQSHEHDS 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01729 801 Pfam D-mannose binding lectin 71 157 IPR001480 -
Spst4g01729 801 Gene3D Phosphorylase Kinase; domain 1 482 590 - -
Spst4g01729 801 Gene3D Transferase(Phosphotransferase) domain 1 591 801 - -
Spst4g01729 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 201 IPR036426 -
Spst4g01729 801 FunFam S-receptor-like serine/threonine-protein kinase 483 590 - -
Spst4g01729 801 ProSitePatterns Protein kinases ATP-binding region signature. 521 544 IPR017441 GO:0005524
Spst4g01729 801 PANTHER OS07G0415500 PROTEIN 11 797 - -
Spst4g01729 801 FunFam Serine/threonine-protein kinase 591 801 - -
Spst4g01729 801 CDD B_lectin 42 146 IPR001480 -
Spst4g01729 801 PIRSF SRK 1 801 IPR024171 GO:0004674
Spst4g01729 801 ProSiteProfiles Bulb-type lectin domain profile. 22 142 IPR001480 -
Spst4g01729 801 CDD PAN_AP_plant 329 414 - -
Spst4g01729 801 SMART blect_4 29 146 IPR001480 -
Spst4g01729 801 SUPERFAMILY Protein kinase-like (PK-like) 499 795 IPR011009 -
Spst4g01729 801 Pfam Protein kinase domain 519 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01729 801 ProSiteProfiles Protein kinase domain profile. 515 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01729 801 SMART serkin_6 515 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01729 801 CDD STKc_IRAK 521 795 - -
Spst4g01729 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Spst4g01729 801 Pfam S-locus glycoprotein domain 251 314 IPR000858 GO:0048544
Spst4g01729 801 Gene3D - 29 145 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01729 Spst-Chr4 57294498 57297292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01729 505 798 Trihelix Transcription Factor Family AT5G38560 42.809 3.32e-67 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst4g01729 Pkinase 2.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01729 - - gmx:100806357 1438.32