Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01728 ATGGAAGAAGTGGTGTCGGTTATTCGAAATCAGTACCGCAAATTGCACACAACAAGATCATGGGACTTTATAGGGTTACCTTTGACTGCTAAGAGAAAACAGAAGTCAGAAAGTGACATAATTGTGGCTCTGTTGGATACAGGGGTCACTCCTCAGCTTCAAAGCTTCAAGGACGATGGATTTGGTCCTCCACCTGCTAAATGGAAAGGAAGTTGTGATAAATATGCGAATTTTTCAGGCTGCAATAACAAGCTCATAGGAGCCAGATACTTCAAGATTGGTGGAAGGCCTGATCCATCTGACATATTATCCCCTATAGATGTGGTTGGTCATGGAACTCACACTGCATCAACAGCAGCAGGCAATCTTGTCCCAGATGCAATGGCTGCTAGTGGCGTTGATAGGGATTTCCGAAGCACTATTCAGTTGGGGAATGGAAAGAATTTTTCTACTTCAGCCATGATGCATGTATGTAGCTCAGCATTTAAGGGGGGAGGACTGAGCACCTTCAATCCAAAGCAAAAACAGTACCCCCTTGTTAATGGGACTGATGCGGCCCGAAACACTGGAAGCAAAGAAAATGCTAGGTTCTGCTATGAAGACTCCTTGGATCCACACAAGGTGAAAGGAAAACTTGTATACTGTAGTTTAAGTGGTTGGGGCAGTGAAGCTGTTGTGAAAGGAATTGGAGGCATTGGCAGTATAATGGAAAGTGATGACGTTTTTGAAATTGCTCAAATATTCATGGCTCCGGCTACCATTGTGAATAGTAGCATAGGTCAAATTATTACCAATTATACACAGTCCACAAGGTCACCATCAGCAGTAATATATAAGACCCACGAAGTAAAGATTCCAGCTCCATTTACTGCTTCATTTTCATCTAGGGGTCCAAATCCAGCATCTAACCATATTCTCAAGCCTGATGTTACAGCTCCTGGCCTTAACATCTTGGCATCTTATACACCTATGCAGTCAATTTCTGGAGAAAAAGGGGATACCCAATTTTCAGAATTTACACTTATGTCTGGAACTTCTATGTCATGCCCTCATGTTTCTGGAGTAGCAGCATATGTGAAGTCGTTTCACCCAGATTGGTCTCCTGCTGCAATCAGATCAGCCATTATTACCACAGCCGTTGAGCCTCAAAGTCACATCATATCTTGTAGATTCTTATGCCATGAGGGCTATAATGGTTCCACTCTATCAGTGTTAGTTGGCTCTCGTGTGAACTGCACGTCTTTGCTCCCAGGGGTTGGCCATGATGCTATCAACTATCCCACCATGCAACTAAGGGTGAAAAACAACTCAGGCACAACAGTAGCAGTTTTCAGGAGAAGAGTCACCAATGTCGGTCCTTCTCCAACCATCTTCAATGCCACCATCAAATCTCCAAAAGGGGTGGAAATCACAGTGAAACCTACAAGCCTCATTTTCTCTCACACCCTGCAGAAGAAGAGCTTCAAGGTAGTGGTGAAAGCAAAGTCTATGGCAAGCATGAAAATTCTGTCAGTGGCCATAATCAAGCTTGTAGCATTCATTGCCTGTGTGCTAAAACACATGGCTCTTCTTGTGCTCAATGTTGACATTTTAATAATGTCTAGGCAAGCATCAAATGAGAATCTTAGCTATGATCTTATAGAAGCTTCAGTTTAG 1656 0.4312 MEEVVSVIRNQYRKLHTTRSWDFIGLPLTAKRKQKSESDIIVALLDTGVTPQLQSFKDDGFGPPPAKWKGSCDKYANFSGCNNKLIGARYFKIGGRPDPSDILSPIDVVGHGTHTASTAAGNLVPDAMAASGVDRDFRSTIQLGNGKNFSTSAMMHVCSSAFKGGGLSTFNPKQKQYPLVNGTDAARNTGSKENARFCYEDSLDPHKVKGKLVYCSLSGWGSEAVVKGIGGIGSIMESDDVFEIAQIFMAPATIVNSSIGQIITNYTQSTRSPSAVIYKTHEVKIPAPFTASFSSRGPNPASNHILKPDVTAPGLNILASYTPMQSISGEKGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPDWSPAAIRSAIITTAVEPQSHIISCRFLCHEGYNGSTLSVLVGSRVNCTSLLPGVGHDAINYPTMQLRVKNNSGTTVAVFRRRVTNVGPSPTIFNATIKSPKGVEITVKPTSLIFSHTLQKKSFKVVVKAKSMASMKILSVAIIKLVAFIACVLKHMALLVLNVDILIMSRQASNENLSYDLIEASV 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01728 551 ProSiteProfiles Serine proteases, subtilase domain profile. 20 416 - -
Spst4g01728 551 Pfam Subtilase family 291 383 IPR000209 GO:0006508|GO:0008236
Spst4g01728 551 SUPERFAMILY Subtilisin-like 25 382 IPR036852 GO:0004252|GO:0006508
Spst4g01728 551 Gene3D Peptidase S8/S53 domain 39 127 IPR036852 GO:0004252|GO:0006508
Spst4g01728 551 Gene3D - 134 283 - -
Spst4g01728 551 Gene3D - 392 509 - -
Spst4g01728 551 PRINTS Subtilisin serine protease family (S8) signature 37 56 IPR015500 -
Spst4g01728 551 PRINTS Subtilisin serine protease family (S8) signature 107 120 IPR015500 -
Spst4g01728 551 PRINTS Subtilisin serine protease family (S8) signature 343 359 IPR015500 -
Spst4g01728 551 Gene3D Peptidase S8/S53 domain 128 381 IPR036852 GO:0004252|GO:0006508
Spst4g01728 551 Pfam Fibronectin type-III domain 424 502 IPR041469 -
Spst4g01728 551 ProSitePatterns Serine proteases, subtilase family, serine active site. 344 354 IPR023828 -
Spst4g01728 551 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 390 491 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01728 Spst-Chr4 57289674 57293843 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01728 128 383 Subtilisin-like Serine Gene Family AT4G00230 60.156 1.60e-99 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01728 - - ccaj:109800351 586.645