Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01725 ATGATGAAGAAGATTGACCTTCTTGAAGCGGCAAAACGGAAGTTTTTGGGAGAAGGTTTGGGGTCTTGCTCCATTGAGGAATTGGAACGGATAGAACAACAGTTGGAGAGGAGTTTAAGTAATGTTCGAGCAAGAAAGCTCCAGGTTTTCAAAGAACAAATTGAGCAACTAAAGGAAAAGGAAAAAGTCCTACTAGATGAAAATACCAGGCTCACTGAAAATGCAAAGCTCTCTGAGAAGCAATCAATCAAGGATCAGAATGAACATCAACCCCAATACTATGCAGAAAGTAGTCCAAGTTCAGATGTGGAGACCGAATTGTTCATTGGACTTCCAGAACAAAGAACAAGACGCCTCTCTTATCAGGAAGCCTCTCAAGATTCCACCACAAAGGAATCCTCTACTCCAGTTTATACCATTTGGTTCCAACTCCATCTGAAACCTGAAAATGAGTATGGAGGGAGAGAGAGATATGAGGATGAAGGAATGTCCATTGGAGTTAGACCTAATGAAGAAGTGTCCATGAAAACTATCCAAAATGAGTTAAATGATCCAACATGCCTAATTGCTAACAAAAACTTCGACAGATATGAGTACAGTAAGCTGGTGATGAGAGATAAAATTGAAAGAGAAGAAAATGGAAAGTACAAAGCGAAGAAGAGTATTGAATGGAGGCAGAGGGTTAGCAGAGTGACAGAGAAGTTTGAGAAGCCAAGAAGAAAAAGTACATTAAAGTTTTCATGTGTCAGAAGAACTGCATAA 762 0.3963 MMKKIDLLEAAKRKFLGEGLGSCSIEELERIEQQLERSLSNVRARKLQVFKEQIEQLKEKEKVLLDENTRLTENAKLSEKQSIKDQNEHQPQYYAESSPSSDVETELFIGLPEQRTRRLSYQEASQDSTTKESSTPVYTIWFQLHLKPENEYGGRERYEDEGMSIGVRPNEEVSMKTIQNELNDPTCLIANKNFDRYEYSKLVMRDKIEREENGKYKAKKSIEWRQRVSRVTEKFEKPRRKSTLKFSCVRRTA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01725 253 Pfam K-box region 1 74 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst4g01725 253 Coils Coil 47 74 - -
Spst4g01725 253 MobiDBLite consensus disorder prediction 87 102 - -
Spst4g01725 253 MobiDBLite consensus disorder prediction 76 102 - -
Spst4g01725 253 ProSiteProfiles K-box domain profile. 1 83 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst4g01725 253 Coils Coil 25 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01725 Spst-Chr4 57206847 57212606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01725 1 62 MADS-box Gene Family AT2G45660 74.194 2.20e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01725 - - gmx:100807963 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01725 4 57206847 57212606 Spst4g01725 4 57206847 57212606 ECH
Spst1g00989 1 12099529 12118332 Spst4g01725 4 57206847 57212606 PCT