LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst4g01711	ATGCCATCGCGTCCGCCGTCACCGCCCTCCTCTCCCGCCGTCACTCATCGCCGCGAGATCATTCTTTGCGGCGCAATCAGCGGCGCGATCTTCCTAGCGGCGATAATCGTCTCCGTCACGGTCTTCATCTACCGCAAACTCTCCTACAACCGAACGGCGCCGTTTGAGCACAACCAGCGCCGTTTCTCGTACTCCGTTCTGCGCCGAGCGACGAACTCGTTCTCGCCGTCGACGAAGCTCGGGCACGGCGGGTTTGGTTCGGTTCATAAAGCGACTCTGCCTTCTGGCCAGACCGTGGCGTTGAAAGTGATGGACTCGCCCGGGTCAATCCAGGGGGAGAGAGAGTTCCATAACGAGTTGACGCTGTGTTCGAATCTGAAGTCGCCGTTTGTTATTTCGTTGCTGGGTTTTTCTTCGGACCGGTGCGGTCGGAAGCTGGTCCTGGTCTACGAGCTGATGCCGAACCGCAGTTTGCAGGACGCGCTGCTGGACCGTCGGTGTCCGGAGCTGATGTGCTGGGGGAAGAGGTTCGACGTCGCCGTTTCGGTGGCGATGGGGTTGGAGTATTTGCACCACGTGTGTGAGCCTCCGGTGATTCATGGGGATATAAAGCCGAGTAATGTGTTGCTGGATGATGATTTTAGGGCGAAGATTGGGGATTTTGGGCTTGCTAGGGTTAAGGCGGTGGAGGATCTGGGAATGGTGGAGGAGAAGAAGAAGGAAGGGGTTGTAGAGATTGGGATTGAGGAGTTTGGGGTGGCGGAGGAGGGAGAGAGTGTGAGTGTGGTGGATGTTGACCGGTCGCCGGAGAGTTGTCCGGTGAGGGTTGCGGATTACTCTGACGCGTCGCCGGTGGGGGGTGATAAGTTGAGTGTGGTGTCGGATGGGTGTTTCGAGAGTGTTGATAGTGAGAATGTAAATTTGAATAAGAAGAAGGGTGGTGGTGGTGGTGGTGGTGGTTCAGGGAGGGATTGGTGGTGGAGGCAGGAGAGTGGGGGAGGGGGGGAATCGGGGAGGGTGAAGGATTATGTGATGGAGTGGATCGGGAGTGAGATAAAGAAAGAGAGGCCCAAGAGTGAATGGGTTGATTCGTGTTCATCTTCTTCTCCTAAGGTGGAGAATGAGAATGTGAATGGGAATGAAAAGAATAAGAGTAAGAAGAAGGAGAGGAAGAGGTTGGATTGGTGGGCTTCTCTTGATGAGGAGAGGGTGAAGAGTAAGGTGAAGAAGAATCGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTTTGTGAGGAGTTATCTAAAAAGAGTAGGAAGAAGAAGAGGGGTTTGGAGTGGTGGCAGAGGGAGGAGGAAGGGGTGGAGCAGAAGAAGAAGAGGAAGAGCAAAGGGAGTAGAGGGAGTATTGATTGGTGGTTGGATGGGTTGAGTGGGGAGATAAGGAACAATGGGAGGAGGAATAGCCAGGATTGGGGGGTTAGTGGGGATGTGCCAAAGAGTGGTGGGATCAGTAGCACCCCTAGTATGAGGGGGACTGTGTGTTACATTGCTCCTGAGTATGGTGGAGGGGGACAATTGTCTGAGAAGTGTGATGTGTACAGTTTTGGGGTTTTACTTTTGGTTCTGGTGGCGGGGAGGCGGCCGCTGCAGGTGACAGCATCGCCCATTTCGGAGTTTGAGAGGGCCAATTTGATTTCCTGGGCCAGGCAGCTTGCTCACAATGGGAGGCTTTTAGATCTTGTTGACACTTCTATTCATTCATTGGATAAGGAGCAAGCGCTGCTCTGCATCACCATTGCCTTGTTGTGTTTGCAGAGGTGCCCCGGGAAGAGGCCTTCAATGAAGGAGGTTGTGGGAATGCTCAATGGGGAAGCTGAGCCACCACACTTGCCGTTCGAGTTCTCACCATCACCGCCGTCAAATTTTCTGTTCAAGGGGCGGAAGAAGGCTCGGTGA	1935	0.5421	MPSRPPSPPSSPAVTHRREIILCGAISGAIFLAAIIVSVTVFIYRKLSYNRTAPFEHNQRRFSYSVLRRATNSFSPSTKLGHGGFGSVHKATLPSGQTVALKVMDSPGSIQGEREFHNELTLCSNLKSPFVISLLGFSSDRCGRKLVLVYELMPNRSLQDALLDRRCPELMCWGKRFDVAVSVAMGLEYLHHVCEPPVIHGDIKPSNVLLDDDFRAKIGDFGLARVKAVEDLGMVEEKKKEGVVEIGIEEFGVAEEGESVSVVDVDRSPESCPVRVADYSDASPVGGDKLSVVSDGCFESVDSENVNLNKKKGGGGGGGGSGRDWWWRQESGGGGESGRVKDYVMEWIGSEIKKERPKSEWVDSCSSSSPKVENENVNGNEKNKSKKKERKRLDWWASLDEERVKSKVKKNRKPREWWKEEFCEELSKKSRKKKRGLEWWQREEEGVEQKKKRKSKGSRGSIDWWLDGLSGEIRNNGRRNSQDWGVSGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCLQRCPGKRPSMKEVVGMLNGEAEPPHLPFEFSPSPPSNFLFKGRKKAR	644

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst4g01711	644	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	198	210	IPR008271	GO:0004672\|GO:0006468
	Spst4g01711	644	PANTHER	OS07G0586332 PROTEIN	7	644	IPR044576	-
	Spst4g01711	644	MobiDBLite	consensus disorder prediction	476	495	-	-
	Spst4g01711	644	MobiDBLite	consensus disorder prediction	359	389	-	-
	Spst4g01711	644	SUPERFAMILY	Protein kinase-like (PK-like)	49	632	IPR011009	-
	Spst4g01711	644	ProSiteProfiles	Protein kinase domain profile.	74	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst4g01711	644	MobiDBLite	consensus disorder prediction	308	339	-	-
	Spst4g01711	644	Pfam	Protein kinase domain	77	226	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst4g01711	644	Pfam	Protein kinase domain	483	611	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst4g01711	644	Gene3D	Transferase(Phosphotransferase) domain 1	473	620	-	-
	Spst4g01711	644	Gene3D	Transferase(Phosphotransferase) domain 1	153	244	-	-
	Spst4g01711	644	Gene3D	Phosphorylase Kinase; domain 1	37	152	-	-
	Spst4g01711	644	ProSitePatterns	Protein kinases ATP-binding region signature.	80	102	IPR017441	GO:0005524
	Spst4g01711	644	SMART	serkin_6	74	614	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst4g01711	644	FunFam	Os07g0541700 protein	153	241	-	-
	Spst4g01711	644	MobiDBLite	consensus disorder prediction	362	376	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst4g01711	Spst-Chr4	57054813	57056747	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst4g01711	492	614	Receptor kinase-like Gene Family	AT3G58690	37.209	8.96e-14	71.6

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XI	Spst4g01711		Pkinase	1.6e-25	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst4g01711	-		-	gmx:100814933	1007.28