Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01702 ATGGACTACCTTTCACTTCTTCTACTAATCACCATAGTATGGTTGAGCATTCGTGTACTCATCTCAAGCTTCAAACCAATCAGATCCTCAAAATACCCTCCAGGGCCTCACCCTTTTCCTATCATAGGAAACATCTTGAAGCTTGGCAACCAGCCTCATCAATCACTTGCCAAGCTTTCTCAAATTTATGGTCCTATAATGAGTCTCAAGCTTGGTGTCACTACCACCATAGTCATTTCCTCTCCACGTGTTGCCAAAGAAGTACTGCAAAAAAAGGATCTAATATTTGCTAACAGGGCAATCCCAAATACTGTCCGAGCACTTGATCATCACATACTTTCAATGGTGTGGATGCCACCTGTAGCACAGTGGAGGATCCTTAGGAGAGCTTGTGCTACCAAAGTGTTCTCTTCTCAGCTACTTGATTCCACACAAGTTTTTCGTCAGAGAAAGGTGCAAGAATTGATGGATTATGTCAAGGAAAGATGTAATAGAGGTGAAGCTTTGGATATTGGTGAGGCTTCCTTTACAACTGTGCTTAATTCCATATCAAACACTTTCTTCTCAATGGATTTGGCTCATTACACTTCTGACAAGTCTCAAGAGTTCAGGGACATCATTTGGGGCATCATGGAAGAAGCTGGAAGGCCTAATGTTGTGGACTTTTTTCCCATCTTTCGTCTGCTTGATCCACAAGGTGCACGGAGAAGGATGAAAGGTTATTTTGGAAAGTTAATTGCGTTTTTCGATGGTCTCATAGAAGAAAGACTGCGTTTAAGGGCATTAGAGAACGAATCCAATGCATGCAATGATGTTTTAGATTCTATGATGGAACTTATGCTCGAAGACAATTCACAAGTCACTCGCCCTCATGTTCTGCATTTGTTTCTGGATTTATTTGTGGCTGGAATAGACACAACATCAAGCTCGATAGAATGGGCGATGTCTGAGTTGTTACGTAATCCAGAAAAACTAGAAAAAGTTAGAAAAGAGCTTCAACAAGTCCTTGTCAAAGGCGAACAACTAGAGGAATCGCATATCTCAAAGCTTCCTTTCCTACAAGCAGTGGTGAAGGAAACTTTCCGCTTGCACCCACCTGTCCCATTGTTAGTGCCACACAAGTCAGAAGTCGATATTGAACTATGTGACTTCATGGTACCTAAAAGTGCCCAAATTCTGGTTAATCTGTGGGCCATGGGAAGGGATTCAAGTATTTGGCCAAACCCAAATGAATTTACACCCCAAAGATTCTTGGAAAGTGACATTGATTTTAAAGGCCATGATTTCGAATTAATACCCTTTGGAGCAGGAAGAAGGATCTGTCCTGGGTTGCCATTGGCTTCTAGAACTACGCATATTGTATTGGCCTCTCTTCTGTATAACTATGATTGGAATCTCGAAGATGGAAAAAAAGCACAAGATATGGATATATCAGAGAAATATGGGATTACCTTGCGTAAGGCACAACCTCTCGTAGTAATTCCCATCCAAGCGTAA 1497 0.4155 MDYLSLLLLITIVWLSIRVLISSFKPIRSSKYPPGPHPFPIIGNILKLGNQPHQSLAKLSQIYGPIMSLKLGVTTTIVISSPRVAKEVLQKKDLIFANRAIPNTVRALDHHILSMVWMPPVAQWRILRRACATKVFSSQLLDSTQVFRQRKVQELMDYVKERCNRGEALDIGEASFTTVLNSISNTFFSMDLAHYTSDKSQEFRDIIWGIMEEAGRPNVVDFFPIFRLLDPQGARRRMKGYFGKLIAFFDGLIEERLRLRALENESNACNDVLDSMMELMLEDNSQVTRPHVLHLFLDLFVAGIDTTSSSIEWAMSELLRNPEKLEKVRKELQQVLVKGEQLEESHISKLPFLQAVVKETFRLHPPVPLLVPHKSEVDIELCDFMVPKSAQILVNLWAMGRDSSIWPNPNEFTPQRFLESDIDFKGHDFELIPFGAGRRICPGLPLASRTTHIVLASLLYNYDWNLEDGKKAQDMDISEKYGITLRKAQPLVVIPIQA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01702 498 Pfam Cytochrome P450 33 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Spst4g01702 498 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 Gene3D Cytochrome P450 24 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 Coils Coil 325 345 - -
Spst4g01702 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 497 - -
Spst4g01702 498 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 FunFam Cytochrome P450 76C4 25 494 - -
Spst4g01702 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01702 498 CDD CYP76-like 60 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01702 Spst-Chr4 56922698 56924267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01702 28 497 Cytochrome P450 AT2G45550 49.049 3.26e-174 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01702 - - gmx:100779789 861.677