Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01694 ATGGACGACGACTCGAAACGACAATGGTCCCTCAGCGACTTCGAGATCGGAAAGCCTCTTGGCAAAGGCAAATTCGGCAGAGTCTACGTCGCCAGAGAACTCAAGAGCAAATTTGTTATTGCATTGAAGGTTATTTCGAAGGAACAACTTGAGAAGTACAGAATCCATCATCAACTGAGGAGGGAGATGGAAATTCAGTTCAATCTGAAGCACCCGAACATCCTTCGTCTCTATGGTTGGTTTCATGACTCTGAGAACGTCTTTTTGATTCTGGAATATGCTCACAATGGTGAGCTTTACAAGGAGCTTAGCAAAAAAGGGCATTTCAGTGAGCAGCAAGCTGCCACGTATATTTTAAGCCTTACAAAGGCATTGGCATATTGTCATGAGAAGCATGTAATTCACAGGGATATCAAGCCTGAAAATTTGTTGCTTGATCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCAGTACAATCTAGAAGCAAAAGGCATACCATGTGTGGAACCTTGGATTATTTAGCACCCGAAATGGTAGAAAACAAAGCTCATGATTACGCAGTTGATAACTGGACTTTGGGTATCCTTTGCTATGAATTTCTTTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAGTTGATACCTTCAAAAGGATTATGAAGGTTGACTTAAGTTTCCCTTCTACTCCTTATGTTTCTCCAGAAGCCAAACATCTTATTAGTCGGCTTCTGGTAAAAGACTCTTCACGAAGACTCTCACTTCAGAGGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCCTATGGGTGTCTGCAACTAG 831 0.4212 MDDDSKRQWSLSDFEIGKPLGKGKFGRVYVARELKSKFVIALKVISKEQLEKYRIHHQLRREMEIQFNLKHPNILRLYGWFHDSENVFLILEYAHNGELYKELSKKGHFSEQQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEAESQVDTFKRIMKVDLSFPSTPYVSPEAKHLISRLLVKDSSRRLSLQRIMEHPWIIKNANPMGVCN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01694 276 CDD STKc_Aurora 13 265 - -
Spst4g01694 276 Gene3D Transferase(Phosphotransferase) domain 1 98 273 - -
Spst4g01694 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01694 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 3 275 IPR030616 GO:0004672
Spst4g01694 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Spst4g01694 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01694 276 SUPERFAMILY Protein kinase-like (PK-like) 7 269 IPR011009 -
Spst4g01694 276 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Spst4g01694 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Spst4g01694 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01694 276 FunFam Serine/threonine-protein kinase ark1 6 274 - -
Spst4g01694 276 FunFam Aurora kinase A 6 97 - -
Spst4g01694 276 PIRSF ILK 4 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01694 Spst-Chr4 56690003 56692838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01694 4 271 CBL-interacting serine-threonine protein kinases AT5G10930 39.636 2.26e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Spst4g01694 Pkinase 5.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01694 K08850 - gmx:100775802 527.324