Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01691 ATGGAGGCAACTGCAGAAGCACTTCCAGACAGACCCTCTGAAGATAAAGGAAAAAAGAGCCCTCATGTGAATGTGACAATGGAAGCTAAGCCTCTTAGGATTGTTCCCTCTTCACACAACACTTCTGGTGGGCCCCAGAAGAAGATTGACATTGGACACGCGACGGAAGGTGGTCTTGGTGTTGGTGAGGGAAAGAGGGTTGTTATGCTCATGGAAGAGAAAGAAAAAGAGAAAGAAAACTCTTCCAACAGAGTTAAACTTCATCTGGGGGTTGATGCTTCTCATTCTGCAACACCAGAAACAAACCATGTGATCACTGAAGCTCAAAGGCGTGAGCTTCACCACCAAGTTTTCATCTTCAATCACTTGGCTTATAAACTTCCTCCTCCTCATCACCTCATGCAATTCCCAAGCAACATGTCAGAATACAGTTTCCTGGGTTTTGATCACGGGAGTGTGGTGGATCCAGAACCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGATGCAGTAAGAGTGTAGTGCCTGATCAAAAGTACTGTGAAAGGCACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAGCATCTCAAGTTAACTCACCTTTGGCAACAAAACCTTCTACCAAGTCACCTACCAAATCAACCTCAAAAACAGTATTTGAAATTTCAAATCCAAACCTTACGGCCATTCAACCTAGTGACATACCTTCCACTACCCCATCAAGGAGCCTCAGCATTGACAATTGCTCTTCCATGAATAGGTCGAAAAATTTGGTGAGTGCTGCTGACTACCTCACGGGGTTTTCTTCCACCTCTGCCGTGTCCCCTGGCTCCACTCCTGCCACTGCAGTCAACCCTAAGGTGGCTGCAACAATCAGCAGTGTGAACTCGGGTAACAAAAGTTGCCTAAAGATATGCCAGAAAGATAACCAGTCCAAGAGCTGTATCGGTAACAACAGAGGTAATAGAAGTGATGGGAAAGGAAGCATTGTTGGTGATTCTAATGGCATCTCTACTGGAATAGGCTTCTCCCCAACGAGTGTTCTTCAAGTTTTTGGTAGCAACCCGTCTTACCTCAATGATAAAACCAACATAGAACCTGCACCCGGTAGGTGCAGGAGAACAGACGGCAAGAAGTGGCAGTGCAAGAGTGCCGTTCTTCCTGGTCAGAAGTACTGCGCCACACACATGCATAGAGGTGCTAAAAAGCGTTTTACAAACCATGAAACAGCAGCTACTACCACTACTGCTGCTTGTTCTTCCGCTACCATTGCTCGGTTGCCTCACTCTCCAGCTACAACCAACATGCAGAAAGCGCATTCTGCAATTCCAAGTACAAATCTTTCCATGTCAGTTCCAGCAAGTGCTCCTTTCATACAATGCAATGAGAAAAGCACCAGTAGCGGTGACACCGATACCACCATCAGTGACACCTTGCAAGAGTGTAGCTATACTTCTTTCTGA 1476 0.4587 MEATAEALPDRPSEDKGKKSPHVNVTMEAKPLRIVPSSHNTSGGPQKKIDIGHATEGGLGVGEGKRVVMLMEEKEKEKENSSNRVKLHLGVDASHSATPETNHVITEAQRRELHHQVFIFNHLAYKLPPPHHLMQFPSNMSEYSFLGFDHGSVVDPEPHRCRRTDGKKWRCSKSVVPDQKYCERHMHRGRNRSRKPVEASQVNSPLATKPSTKSPTKSTSKTVFEISNPNLTAIQPSDIPSTTPSRSLSIDNCSSMNRSKNLVSAADYLTGFSSTSAVSPGSTPATAVNPKVAATISSVNSGNKSCLKICQKDNQSKSCIGNNRGNRSDGKGSIVGDSNGISTGIGFSPTSVLQVFGSNPSYLNDKTNIEPAPGRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRFTNHETAATTTTAACSSATIARLPHSPATTNMQKAHSAIPSTNLSMSVPASAPFIQCNEKSTSSGDTDTTISDTLQECSYTSF 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01691 491 MobiDBLite consensus disorder prediction 196 248 - -
Spst4g01691 491 Pfam WRC 371 410 IPR014977 -
Spst4g01691 491 Pfam WRC 156 198 IPR014977 -
Spst4g01691 491 PANTHER GROWTH-REGULATING FACTOR 5 356 468 IPR031137 GO:0005634|GO:0006351|GO:0032502
Spst4g01691 491 MobiDBLite consensus disorder prediction 7 23 - -
Spst4g01691 491 ProSiteProfiles WRC domain profile. 370 415 IPR014977 -
Spst4g01691 491 ProSiteProfiles QLQ domain profile. 104 139 IPR014978 GO:0005524|GO:0005634|GO:0006355
Spst4g01691 491 MobiDBLite consensus disorder prediction 1 60 - -
Spst4g01691 491 MobiDBLite consensus disorder prediction 182 248 - -
Spst4g01691 491 ProSiteProfiles WRC domain profile. 155 199 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01691 Spst-Chr4 56651211 56654325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01691 108 408 GRF Transcription Factor Family AT2G45480 32.424 8.54e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01691 - - pvu:PHAVU_010G048400g 717.613