Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01664 ATGGTGCAAAGTGAAGGAGGTGATTCGATTTTAGACGGGAAGAAACATGTGCGTGTTACGAATGACATGAAAGATGGGGTTCTGATTTATCTCCACTGTCGATCAAAGAATGATGATCTTGGAGTTCATGTTATTGCCAATGGAGAGTTCCAAGAATGGAGCTTCAAAGACAACCTCGGTGACACCACTCTCTTTTGGTGTTCCATGGATGCATACAACGTTCAAATGAGTTTTGAAGTTTATAGTGCCAAAACTGATTCTGCAAAATGTGATAAACAGTGCTATCGAAGTCTGAGGAAAGATGGAGCATATTTCTATTATCAATTTCAAAACATTTGGAAGAAGGAACTGTCATGGACTATTCATGAACCCCCAACTATGCCCCCCGCTTTCTAA 396 0.404 MVQSEGGDSILDGKKHVRVTNDMKDGVLIYLHCRSKNDDLGVHVIANGEFQEWSFKDNLGDTTLFWCSMDAYNVQMSFEVYSAKTDSAKCDKQCYRSLRKDGAYFYYQFQNIWKKELSWTIHEPPTMPPAF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01664 131 Pfam Plant self-incompatibility protein S1 16 119 IPR010264 -
Spst4g01664 131 PANTHER - 14 113 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01664 Spst-Chr4 56384793 56385188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01664 14 119 Carbohydrate Esterase AT3G16970 27.523 8.64e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01664 - - pvu:PHAVU_010G083600g 161.384