Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01663 ATGTTGTTGATGATGGTAAACACGGTGCAGAGTGAAACACAGGGTAACGGGTTGTTTGGGGACATGAAACATGTGCGTATGATAAATGATATGAAAGAGGGTGTTCTTGTTCGTCTCCATTGTCGATCCAAGAATGATGATCTTGGAGAACGTGTTCTTGCCTTTAGACAGCACTGGGAATGGAAGTTCAACGATAACGTCATCAGCTCCACTCTTTTTTGGTGTAATATGCATGCAAACAATGTTGTGAGAAGTTTTAGAGTATATTTTTGCGATGATGATTATCTACGATGTAACACACAATGTTATCGAAGTCTGAGGATGGATGGAGCATATTACTATCATCAAATTCGAAATGTATGGCAGAAGCAACTGTCATGGATTGTTGACGCATAA 396 0.3965 MLLMMVNTVQSETQGNGLFGDMKHVRMINDMKEGVLVRLHCRSKNDDLGERVLAFRQHWEWKFNDNVISSTLFWCNMHANNVVRSFRVYFCDDDYLRCNTQCYRSLRMDGAYYYHQIRNVWQKQLSWIVDA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01663 131 Pfam Plant self-incompatibility protein S1 24 127 IPR010264 -
Spst4g01663 131 PANTHER - 22 116 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01663 Spst-Chr4 56380152 56380547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01663 11 127 Carbohydrate Esterase AT3G16970 29.167 7.74e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01663 - - pvu:PHAVU_010G083600g 128.257