Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01662 ATGGTCTCCATAAGTTTCAATTGCAAGAGTAGAATTGCGTTATTGAAACAGATTATGCGAATGGTTACTCATCATAATCATCTGAGAAGCATGAAGGCATTAGTGACAGTTATGGCTGTGTTGTTGATGATGGTAAACATGGTGCATAGTGAAGAAGAAGGTGATGGGTGGTTTTTAGGCAATAAGAGACGTGTGCGCATTACAAATAATATAAAGAATGTTCTTGTTTTCATCCATTGTCGATCCAAGGATACTGATCTTGGAAAAAATGTTCTTGACTTTAGACAGTACGAAGAATGGAGCTTCAGAGACAACTTTGGTGGCACCACTCTTTTCTGGTGTGCCATGTCTGCAAACGATGTCCACACAAGTTTTGAGGTTTATAGTGCCAAAACTTCTCATATTGAATGTGGTGATGATTGTTATCGAAGTCTAAGAAGCATGTTGAAGCTATTAGTAACAGTTATTGTGTTGGCGATGATGGTAAACATGGTGCCAAGCGAAGAAGAAGGTGATGGGTTTTTAGACGGGAAGAAACACGTGCGTGTTCAAAACGATATGACGAATGGCATTGTCGTTCATCTCCATTGTCGATCCAGGAATGATGATCTTGGAGAACATGTTCTTGCCTTTGGACAGTACCAAGAATGGAGCTTCAGAGACAACGTTGGTGACACCACTCTTTTTTGGTGTTCCATGTCCGCAAACAATGTCCAAACGAGATTTGAAGTGTACAGTGCCCCTTCTGATCACACCAAATGTGATAAACAATGTTATCGAAGTCTGAGAACAGATGGAGCATATTTCTATGATCAATTTGAAGACACGTGGCAGAAGAGACATTCATGGGATGTTCATGCACACTAA 867 0.4037 MVSISFNCKSRIALLKQIMRMVTHHNHLRSMKALVTVMAVLLMMVNMVHSEEEGDGWFLGNKRRVRITNNIKNVLVFIHCRSKDTDLGKNVLDFRQYEEWSFRDNFGGTTLFWCAMSANDVHTSFEVYSAKTSHIECGDDCYRSLRSMLKLLVTVIVLAMMVNMVPSEEEGDGFLDGKKHVRVQNDMTNGIVVHLHCRSRNDDLGEHVLAFGQYQEWSFRDNVGDTTLFWCSMSANNVQTRFEVYSAPSDHTKCDKQCYRSLRTDGAYFYDQFEDTWQKRHSWDVHAH 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01662 288 Pfam Plant self-incompatibility protein S1 180 283 IPR010264 -
Spst4g01662 288 Pfam Plant self-incompatibility protein S1 64 145 IPR010264 -
Spst4g01662 288 PANTHER - 176 272 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01662 Spst-Chr4 56363594 56367241 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01662 151 267 Carbohydrate Esterase AT3G16970 26.667 4.60e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01662 - - pvu:PHAVU_010G083600g 183.726