Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01638 ATGGCACAACTCAATCTCACATTGCTACTCATTTTCCTCGCTCTCTTCTTCTCATTTCTTGCCACCCCAGTTGAGCCATCATCCCGGACAACACACAAAAATCTTAAAACAATGACCTTCATAAAGTCCTCTTGCAATGGCACCCTCTACCCATATCTCTGCATCCGTTGCCTGGCTCAATATGCCAAATCCCCCATAAATGGTCAACAACACTTGGCTCAATATGCCTTGTCAGTGAGCCTCTCTAGAGCAGTGCACACAAAAGGGTACCTTTTGAAGGTGGCAAAGGAACTTCAAGCCATCAAGAGCAACAAAAGAGAGTACCTAACCTTGCAAGATTGTGTGAACCAAATCACTGATAGTGTGGATCAACTAAGCCAAGCCATGAAAGAACTTCGTAGTTTCAACCAACACGGGTCCACCATCAATGATAACATGTTATGGCACATCAGCAATGTTGAGACATGGGTGAGCACTGCCTTGACAGATGCCAGTAGCTGTGTGTACTCATTTCCTGGTCATAGGATGAGCAAGAGAGTGGCTGCTATCAAGGTTAAGGCCATGAATGTGGCACAAGTTACAAGCAATGCACTTTTCTTGTTTCATAGATATGCATCTACATACCAGAAAGCCACAACTATGACCACCAACAATTCATAA 660 0.4409 MAQLNLTLLLIFLALFFSFLATPVEPSSRTTHKNLKTMTFIKSSCNGTLYPYLCIRCLAQYAKSPINGQQHLAQYALSVSLSRAVHTKGYLLKVAKELQAIKSNKREYLTLQDCVNQITDSVDQLSQAMKELRSFNQHGSTINDNMLWHISNVETWVSTALTDASSCVYSFPGHRMSKRVAAIKVKAMNVAQVTSNALFLFHRYASTYQKATTMTTNNS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01638 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 199 - -
Spst4g01638 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 204 IPR035513 -
Spst4g01638 219 Pfam Plant invertase/pectin methylesterase inhibitor 40 198 IPR006501 GO:0004857
Spst4g01638 219 SMART PMEI_2 36 200 IPR006501 GO:0004857
Spst4g01638 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 204 IPR035513 -
Spst4g01638 219 NCBIfam pectinesterase inhibitor domain 10 203 IPR006501 GO:0004857
Spst4g01638 219 CDD PMEI-like_3 43 206 - -
Spst4g01638 219 FunFam Pectinesterase inhibitor 3 36 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01638 Spst-Chr4 56054064 56054723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01638 41 219 Carbohydrate Esterase AT1G53830 24.064 2.19e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01638 - - gmx:100791798 337.806